[←][→] ath   AT1G12520 Gene
functional annotation
Function   copper chaperone for SOD1  
GO BP
GO:0019430 [list] [network] removal of superoxide radicals  (11 genes)  IBA  
GO:0006878 [list] [network] cellular copper ion homeostasis  (13 genes)  TAS  
GO:0030001 [list] [network] metal ion transport  (310 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA ISM  
GO MF
GO:0016532 [list] [network] superoxide dismutase copper chaperone activity  (1 genes)  IBA IGI IMP  
GO:0004784 [list] [network] superoxide dismutase activity  (9 genes)  IBA  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IBA  
KEGG
Protein NP_001031029.1  NP_001031030.1  NP_563910.2 
BLAST NP_001031029.1  NP_001031030.1  NP_563910.2 
Orthologous [Ortholog page] CCS (sly)  CCS (gma)  LOC4336726 (osa)  LOC7465821 (ppo)  LOC11407925 (mtr)  LOC100263358 (vvi)  LOC100283786 (zma)  LOC103641949 (zma)  LOC103836158 (bra)  LOC103843124 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 3,  mito 1,  pero 1  (predict for NP_001031029.1)
chlo 6,  cyto 3,  chlo_mito 3  (predict for NP_001031030.1)
chlo 9  (predict for NP_563910.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001031029.1)
other 5,  mito 5  (predict for NP_001031030.1)
chlo 8  (predict for NP_563910.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
Genes directly connected with CCS on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
23.6 CSD2 copper/zinc superoxide dismutase 2 [detail] 817365
19.1 CSD1 copper/zinc superoxide dismutase 1 [detail] 837405
9.9 AT3G15640 Rubredoxin-like superfamily protein [detail] 820806
5.4 ARPN plantacyanin [detail] 814816
Coexpressed
gene list		 [Coexpressed gene list for CCS]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259511_at
259511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259511_at
259511_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259511_at
259511_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837808      
Refseq ID (protein) NP_001031029.1 
NP_001031030.1 
NP_563910.2 


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