[←][→] ath   At1g13790 Gene
functional annotation
Function   XH/XS domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0080188 [list] [network] gene silencing by RNA-directed DNA methylation  (38 genes)  IGI  
GO CC
GO MF
KEGG
Protein NP_001318996.1  NP_172834.1 
BLAST NP_001318996.1  NP_172834.1 
Orthologous [Ortholog page] FDM3 (ath)  IDN2 (ath)  FDM2 (ath)  AT4G01780 (ath)  FDM1 (ath)  FDM5 (ath)  LOC4325982 (osa)  LOC4326595 (osa)  LOC4329065 (osa)  LOC7458138 (ppo)  LOC7478299 (ppo)  LOC11425283 (mtr)  LOC11440090 (mtr)  LOC18095040 (ppo)  LOC18102687 (ppo)  LOC25487893 (mtr)  LOC25487894 (mtr)  LOC25489298 (mtr)  LOC25489302 (mtr)  LOC25494210 (mtr)  LOC100782495 (gma)  LOC100786758 (gma)  LOC100790432 (gma)  LOC100790829 (gma)  LOC100798940 (gma)  LOC100806029 (gma)  LOC100812353 (gma)  LOC101244470 (sly)  LOC101250312 (sly)  LOC101255202 (sly)  LOC101256002 (sly)  LOC102665742 (gma)  LOC102668228 (gma)  LOC103830457 (bra)  LOC103842874 (bra)  LOC103843080 (bra)  LOC103853447 (bra)  LOC103870246 (bra)  LOC103872390 (bra)  LOC103873124 (bra)  LOC103873521 (bra)  LOC112416089 (mtr)  LOC123061483 (tae)  LOC123061513 (tae)  LOC123070121 (tae)  LOC123070157 (tae)  LOC123078565 (tae)  LOC123078591 (tae)  LOC123086489 (tae)  LOC123091502 (tae)  LOC123096464 (tae)  LOC123110588 (tae)  LOC123147378 (tae)  LOC123149525 (tae)  LOC123156432 (tae)  LOC123159312 (tae)  LOC123160310 (tae)  LOC123164335 (tae)  LOC123164895 (tae)  LOC123169171 (tae)  LOC123412222 (hvu)  LOC123413430 (hvu)  LOC123443878 (hvu)  LOC123443902 (hvu)  LOC123448048 (hvu) 
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001318996.1)
cyto 5,  nucl 4  (predict for NP_172834.1)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for NP_001318996.1)
other 9,  mito 3  (predict for NP_172834.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with FDM4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT1G26540 Agenet domain-containing protein [detail] 839194
6.5 EMB3120 uncharacterized protein [detail] 820719
6.0 AT2G45100 Cyclin/Brf1-like TBP-binding protein [detail] 819117
5.0 AT2G17442 uncharacterized protein [detail] 3768659
Coexpressed
gene list		 [Coexpressed gene list for FDM4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259448_at
259448_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259448_at
259448_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259448_at
259448_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837939      
Refseq ID (protein) NP_001318996.1 
NP_172834.1 


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