[←][→] ath   At1g14640 Gene
functional annotation
Function   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (22 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001319004.1  NP_172916.1 
BLAST NP_001319004.1  NP_172916.1 
Orthologous [Ortholog page] AT1G14650 (ath)  LOC4328860 (osa)  LOC7462542 (ppo)  LOC7486391 (ppo)  LOC11411169 (mtr)  LOC100786120 (gma)  LOC100790309 (gma)  LOC100794736 (gma)  LOC100797261 (gma)  LOC101246043 (sly)  LOC101250651 (sly)  LOC103836060 (bra)  LOC103872261 (bra)  LOC123063528 (tae)  LOC123069635 (tae)  LOC123072629 (tae)  LOC123080815 (tae)  LOC123445588 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for NP_001319004.1)
cyto 6,  nucl 4  (predict for NP_172916.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001319004.1)
other 6  (predict for NP_172916.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT1G14640 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT2G42330 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein [detail] 818834
6.4 AT5G08230 tudor/PWWP/MBT domain protein [detail] 830719
6.2 AT4G16680 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 827370
Coexpressed
gene list		 [Coexpressed gene list for AT1G14640]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260778_at
260778_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260778_at
260778_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260778_at
260778_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838026      
Refseq ID (protein) NP_001319004.1 
NP_172916.1 


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