[←][→] ath   AT1G14650 Gene
functional annotation
Function   SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein  
GO BP
GO CC
GO:0071004 [list] [network] U2-type prespliceosome  (24 genes)  IBA  
GO:0005686 [list] [network] U2 snRNP  (32 genes)  IBA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001117289.1  NP_001319005.1  NP_172917.1 
BLAST NP_001117289.1  NP_001319005.1  NP_172917.1 
Orthologous [Ortholog page] AT3G49130 (ath)  AT4G16200 (ath)  AT5G06520 (ath)  AT1G14640 (ath)  LOC4328860 (osa)  LOC7462542 (ppo)  LOC11411169 (mtr)  LOC100242352 (vvi)  LOC100242416 (vvi)  LOC100383468 (zma)  LOC100786120 (gma)  LOC100790309 (gma)  LOC100794736 (gma)  LOC100797261 (gma)  LOC101246043 (sly)  LOC101250651 (sly)  LOC102666446 (gma)  LOC103634672 (zma)  LOC103836060 (bra)  LOC103842679 (bra)  LOC103864623 (bra)  LOC103872261 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_001117289.1)
nucl 6,  cyto 4  (predict for NP_001319005.1)
nucl 6,  cyto 4  (predict for NP_172917.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for NP_001117289.1)
other 6,  chlo 5  (predict for NP_001319005.1)
other 6,  chlo 5  (predict for NP_172917.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT1G14650 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.0 MOS1 modifier of snc1 [detail] 828570
8.3 AT2G25970 KH domain-containing protein [detail] 817137
8.1 AT1G33680 KH domain-containing protein [detail] 840259
7.7 AT2G20330 Transducin/WD40 repeat-like superfamily protein [detail] 816552
6.2 AT1G14640 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [detail] 838026
Coexpressed
gene list		 [Coexpressed gene list for AT1G14650]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260779_at
260779_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260779_at
260779_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260779_at
260779_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838027      
Refseq ID (protein) NP_001117289.1 
NP_001319005.1 
NP_172917.1 


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