ATTED-II : GeneID search result

[←][→] ath AT1G15480 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

GO BP

GO:0080156 [list] [network] mitochondrial mRNA modification

(27 genes)

IMP

GO CC

GO:0005739 [list] [network] mitochondrion

(4405 genes)

IBA IDA ISM

GO MF

KEGG

Protein

NP_173001.2

BLAST

NP_173001.2

Orthologous

[Ortholog page] LOC778342 (sly) AT3G15590 (ath) PPR596 (ath) LOC4326909 (osa) LOC4342742 (osa) LOC4351621 (osa) LOC7464096 (ppo) LOC7479672 (ppo) LOC11416123 (mtr) LOC11429425 (mtr) LOC100252030 (vvi) LOC100281211 (zma) LOC100500196 (gma) LOC100805354 (gma) LOC100806780 (gma) LOC103632127 (zma) LOC103650031 (zma) LOC103830428 (bra) LOC103869899 (bra) LOC103872343 (bra)

Subcellular
localization
wolf

chlo 4, nucl 2, mito 2, cyto 1

(predict for NP_173001.2)

Subcellular
localization
TargetP

mito 7

(predict for NP_173001.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G15480 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
9.5	EMB2217	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	844287
8.3	AT2G18330	AAA-type ATPase family protein	[detail]	816348
8.2	AT1G02370	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	837735
6.8	AT1G03830	guanylate-binding family protein	[detail]	839398

Coexpressed
gene list

[Coexpressed gene list for AT1G15480]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

262586_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

262586_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

262586_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	838118
Refseq ID (protein)	NP_173001.2

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