[←][→] ath   At1g21190 Gene
functional annotation
Function   Small nuclear ribonucleoprotein family protein      
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM  
GO MF
KEGG ath03018 [list] [network] RNA degradation (113 genes)
ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_173542.1 
BLAST NP_173542.1 
Orthologous [Ortholog page] LSM3B (ath)  LOC4325074 (osa)  LOC7467821 (ppo)  LOC7469218 (ppo)  LOC11446185 (mtr)  LOC100306547 (gma)  LOC100499782 (gma)  LOC101264277 (sly)  LOC103830597 (bra)  LOC103832139 (bra)  LOC103853050 (bra)  LOC103872911 (bra)  LOC123057691 (tae)  LOC123062718 (tae)  LOC123071535 (tae)  LOC123079875 (tae)  LOC123134847 (tae)  LOC123182155 (tae)  LOC123444803 (hvu)  LOC123446676 (hvu) 
Subcellular
localization
wolf
cyto 6,  extr 2,  chlo 1,  E.R. 1,  cysk 1  (predict for NP_173542.1)
Subcellular
localization
TargetP
other 8  (predict for NP_173542.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03020 RNA polymerase 2
Genes directly connected with LSM3A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.5 NRPB12 DNA directed RNA polymerase, 7 kDa subunit [detail] 834103
7.1 AT3G02190 Ribosomal protein L39 family protein [detail] 820350
7.0 AT2G39500 hexose transporter [detail] 818535
6.6 AT4G32240 uncharacterized protein [detail] 829357
6.2 EMB2752 embryo defective 2752 [detail] 829087
Coexpressed
gene list		 [Coexpressed gene list for LSM3A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259551_at
259551_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259551_at
259551_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259551_at
259551_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838714      
Refseq ID (protein) NP_173542.1 


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