[←][→] ath   At1g22920 Gene
functional annotation
Function   COP9 signalosome 5A      
GO BP
GO:0010971 [list] [network] positive regulation of G2/M transition of mitotic cell cycle  (5 genes)  IMP  
GO:0010387 [list] [network] COP9 signalosome assembly  (6 genes)  IMP  
GO:0000338 [list] [network] protein deneddylation  (12 genes)  IMP TAS  
GO:0010093 [list] [network] specification of floral organ identity  (13 genes)  IMP  
GO:0010100 [list] [network] negative regulation of photomorphogenesis  (16 genes)  IGI  
GO:0009640 [list] [network] photomorphogenesis  (80 genes)  TAS  
GO:0009733 [list] [network] response to auxin  (384 genes)  IGI  
GO:0031347 [list] [network] regulation of defense response  (749 genes)  IMP  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (10 genes)  TAS  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_173705.1  NP_973890.1 
BLAST NP_173705.1  NP_973890.1 
Orthologous [Ortholog page] csn5 (sly)  CSN5B (ath)  LOC4337249 (osa)  LOC7458739 (ppo)  LOC11433036 (mtr)  LOC18100758 (ppo)  LOC25500020 (mtr)  LOC100784909 (gma)  LOC101256005 (sly)  LOC103829303 (bra)  LOC103840816 (bra)  LOC123047047 (tae)  LOC123054875 (tae)  LOC123190715 (tae)  LOC123428089 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_173705.1)
cyto 4,  nucl 3,  pero 3  (predict for NP_973890.1)
Subcellular
localization
TargetP
other 9  (predict for NP_173705.1)
other 9  (predict for NP_973890.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with CSN5A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.1 MSI1 Transducin/WD40 repeat-like superfamily protein [detail] 835935
7.9 GTF2H2 general transcription factor II H2 [detail] 839332
6.7 VIP3 Transducin/WD40 repeat-like superfamily protein [detail] 829105
6.6 AT4G24880 snurportin-1 protein [detail] 828590
4.9 AT1G11800 endonuclease/exonuclease/phosphatase family protein [detail] 837726
Coexpressed
gene list		 [Coexpressed gene list for CSN5A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264724_at
264724_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264724_at
264724_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264724_at
264724_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 838899      
Refseq ID (protein) NP_173705.1 
NP_973890.1 


The preparation time of this page was 0.1 [sec].