ATTED-II : GeneID search result

[←][→] ath AT1G30760 Gene

functional annotation

Function

FAD-binding Berberine family protein

GO BP

GO:0055114 [list] [network] oxidation-reduction process

(1468 genes)

IDA IEA

GO CC

GO:0005576 [list] [network] extracellular region	(3363 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

GO:0050268 [list] [network] coniferyl-alcohol dehydrogenase activity	(2 genes)	IDA
GO:0052747 [list] [network] sinapyl alcohol dehydrogenase activity	(11 genes)	IEA
GO:0045551 [list] [network] cinnamyl-alcohol dehydrogenase activity	(12 genes)	IDA
GO:0071949 [list] [network] FAD binding	(68 genes)	IEA

KEGG

ath00940 [list] [network] Phenylpropanoid biosynthesis (166 genes)

Protein

NP_001319117.1 NP_174363.2

BLAST

NP_001319117.1 NP_174363.2

Orthologous

[Ortholog page] LOC732592 (gma) LOC732593 (gma) MEE23 (ath) AT4G20820 (ath) AT4G20860 (ath) AT5G44360 (ath) AT5G44380 (ath) AT5G44390 (ath) AT5G44400 (ath) AT5G44410 (ath) AT5G44440 (ath) AT1G30700 (ath) LOC4341253 (osa) LOC4341257 (osa) LOC4341258 (osa) LOC4341259 (osa) LOC4341261 (osa) LOC7457662 (ppo) LOC7471681 (ppo) LOC7480403 (ppo) LOC7480408 (ppo) LOC7480409 (ppo) LOC7480410 (ppo) LOC7485160 (ppo) LOC7485161 (ppo) LOC7489112 (ppo) LOC7489114 (ppo) LOC7489116 (ppo) LOC7489117 (ppo) LOC11406991 (mtr) LOC11415235 (mtr) LOC11415951 (mtr) LOC11416804 (mtr) LOC11422032 (mtr) LOC11422989 (mtr) LOC25486316 (mtr) LOC25486318 (mtr) LOC25486319 (mtr) LOC25493334 (mtr) LOC25493352 (mtr) LOC25493353 (mtr) LOC25493354 (mtr) LOC25493355 (mtr) LOC25493356 (mtr) LOC25493357 (mtr) LOC25493365 (mtr) LOC25493366 (mtr) LOC100242277 (vvi) LOC100243731 (vvi) LOC100245584 (vvi) LOC100247412 (vvi) LOC100248870 (vvi) LOC100250740 (vvi) LOC100252519 (vvi) LOC100253961 (vvi) LOC100255905 (vvi) LOC100266314 (vvi) LOC100267923 (vvi) LOC100276794 (zma) LOC100282250 (zma) LOC100775353 (gma) LOC100777594 (gma) LOC100778568 (gma) LOC100779395 (gma) LOC100780114 (gma) LOC100780461 (gma) LOC100781004 (gma) LOC100782093 (gma) LOC100782292 (gma) LOC100782631 (gma) LOC100786800 (gma) LOC100794074 (gma) LOC100796276 (gma) LOC100799990 (gma) LOC100800519 (gma) LOC100801058 (gma) LOC100802131 (gma) LOC100803041 (gma) LOC100810481 (gma) LOC100811019 (gma) LOC100811558 (gma) LOC100812087 (gma) LOC100813706 (gma) LOC101249413 (sly) LOC101249763 (sly) LOC101254601 (sly) LOC101254908 (sly) LOC101254965 (sly) LOC101255262 (sly) LOC101255854 (sly) LOC101256448 (sly) LOC101263376 (sly) LOC101263972 (sly) LOC101264289 (sly) LOC101265606 (sly) LOC102662170 (gma) LOC103629835 (zma) LOC103629842 (zma) LOC103638604 (zma) LOC103827902 (bra) LOC103827906 (bra) LOC103828799 (bra) LOC103839175 (bra) LOC103839178 (bra) LOC103839179 (bra) LOC103839182 (bra) LOC103839322 (bra) LOC103840305 (bra) LOC103840313 (bra) LOC103841228 (bra) LOC103858400 (bra) LOC103858430 (bra) LOC103858724 (bra) LOC103867418 (bra) LOC104645788 (sly) LOC104646055 (sly) LOC107275394 (osa)

Subcellular
localization
wolf

chlo 4, cyto 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_E.R. 1	(predict for NP_001319117.1)
chlo 2, cyto 2, nucl 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, cyto_E.R. 1	(predict for NP_174363.2)

Subcellular
localization
TargetP

scret 9	(predict for NP_001319117.1)
mito 5, other 5	(predict for NP_174363.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	8
ath00941	Flavonoid biosynthesis	3
ath00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
ath00999	Biosynthesis of secondary metabolites - unclassified	3
ath00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

Genes directly connected with AT1G30760 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
4.4	CYP735A2	cytochrome P450, family 735, subfamily A, polypeptide 2	[detail]	843031
4.4	CLE2	CLAVATA3/ESR-related 2	[detail]	827583
4.1	MYB63	myb domain protein 63	[detail]	844259

Coexpressed
gene list

[Coexpressed gene list for AT1G30760]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264527_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264527_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264527_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839958
Refseq ID (protein)	NP_001319117.1
Refseq ID (protein)	NP_174363.2

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