[←][→] ath   AT1G43860 Gene
functional annotation
Function   sequence-specific DNA binding transcription factor  
GO BP
GO:0042256 [list] [network] mature ribosome assembly  (3 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  TAS  
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003676 [list] [network] nucleic acid binding  (4187 genes)  IEA  
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
Protein NP_001322379.1  NP_564488.1 
BLAST NP_001322379.1  NP_564488.1 
Orthologous [Ortholog page] LOC4344458 (osa)  LOC7492443 (ppo)  LOC25496888 (mtr)  LOC100259091 (vvi)  LOC100282435 (zma)  LOC100776352 (gma)  LOC100797497 (gma)  LOC101258649 (sly)  LOC103847709 (bra)  LOC103868737 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001322379.1)
chlo 4,  mito 3,  nucl 3,  cyto_mito 2  (predict for NP_564488.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001322379.1)
mito 5,  other 4  (predict for NP_564488.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT1G43860 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.7 AT2G40430 Nop53 protein [detail] 818636
8.6 EIF2 ALPHA eukaryotic translation initiation factor 2 alpha subunit [detail] 830430
8.6 FUS6 COP9 signalosome complex subunit 1 [detail] 825286
7.9 NBP35 nucleotide binding protein 35 [detail] 835169
7.8 AT3G02320 N2,N2-dimethylguanosine tRNA methyltransferase [detail] 820451
7.6 AT1G67170 sarcolemmal membrane-associated protein [detail] 843037
7.0 AT5G10630 Translation elongation factor EF1A/initiation factor IF2gamma family protein [detail] 830928
6.7 NAR1 ferredoxin hydrogenase [detail] 827338
5.2 AT2G36340 DNA-binding storekeeper protein-related transcriptional regulator [detail] 818207
Coexpressed
gene list		 [Coexpressed gene list for AT1G43860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260868_at
260868_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260868_at
260868_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260868_at
260868_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 840982      
Refseq ID (protein) NP_001322379.1 
NP_564488.1 


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