[←][→] ath   AT1G48050 Gene
functional annotation
Function   Ku80 family protein  
GO BP
GO:0071481 [list] [network] cellular response to X-ray  (2 genes)  IBA  
GO:0015074 [list] [network] DNA integration  (3 genes)  TAS  
GO:0071480 [list] [network] cellular response to gamma radiation  (4 genes)  IBA  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (16 genes)  IBA IMP TAS  
GO:0000723 [list] [network] telomere maintenance  (36 genes)  IBA TAS  
GO:0006302 [list] [network] double-strand break repair  (108 genes)  IMP  
GO:0006310 [list] [network] DNA recombination  (143 genes)  IEA  
GO:0009408 [list] [network] response to heat  (229 genes)  IEP  
GO:0006281 [list] [network] DNA repair  (295 genes)  TAS  
GO CC
GO:0043564 [list] [network] Ku70:Ku80 complex  (2 genes)  IBA  
GO:0000784 [list] [network] nuclear chromosome, telomeric region  (23 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0042162 [list] [network] telomeric DNA binding  (24 genes)  IBA  
GO:0003678 [list] [network] DNA helicase activity  (34 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (343 genes)  IBA IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03450 [list] [network] Non-homologous end-joining (8 genes)
Protein NP_001322093.1  NP_001322094.1  NP_564520.1 
BLAST NP_001322093.1  NP_001322094.1  NP_564520.1 
Orthologous [Ortholog page] LOC7464861 (ppo)  LOC9267125 (osa)  LOC11423056 (mtr)  LOC100250596 (vvi)  LOC100255780 (vvi)  LOC100281554 (zma)  LOC100781545 (gma)  LOC101253129 (sly)  LOC103833047 (bra) 
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 2  (predict for NP_001322093.1)
chlo 5,  cyto 4,  nucl 1,  extr 1  (predict for NP_001322094.1)
chlo 6,  cyto 2,  nucl 1,  extr 1  (predict for NP_564520.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001322093.1)
other 5,  mito 3  (predict for NP_001322094.1)
other 5,  mito 3  (predict for NP_564520.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with KU80 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 CIP4 COP1-interacting protein 4 [detail] 833693
5.2 AT5G40520 DNA double-strand break repair protein [detail] 834050
5.1 AT1G03365 RING/U-box superfamily protein [detail] 10723112
Coexpressed
gene list		 [Coexpressed gene list for KU80]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260729_at
260729_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260729_at
260729_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260729_at
260729_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841223      
Refseq ID (protein) NP_001322093.1 
NP_001322094.1 
NP_564520.1 


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