[←][→] ath   At1g48790 Gene
functional annotation
Function   associated molecule with the SH3 domain of STAM 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0070536 [list] [network] protein K63-linked deubiquitination  (4 genes)  ISS  
GO:0071108 [list] [network] protein K48-linked deubiquitination  (5 genes)  ISS  
GO CC
GO:0016020 [list] [network] membrane  (3629 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0061578 [list] [network] K63-linked deubiquitinase activity  (3 genes)  IEA  
GO:0140492 [list] [network] metal-dependent deubiquitinase activity  (3 genes)  IEA  
KEGG ath04144 [list] [network] Endocytosis (158 genes)
Protein NP_564533.1 
BLAST NP_564533.1 
Orthologous [Ortholog page] AMSH3 (ath)  LOC4324542 (osa)  LOC4326798 (osa)  LOC7453881 (ppo)  LOC7482259 (ppo)  LOC11414692 (mtr)  LOC11417013 (mtr)  LOC11423551 (mtr)  LOC100777366 (gma)  LOC100800636 (gma)  LOC100804754 (gma)  LOC100806201 (gma)  LOC100806590 (gma)  LOC100812784 (gma)  LOC101258096 (sly)  LOC101266109 (sly)  LOC101290616 (tae)  LOC103832981 (bra)  LOC103860829 (bra)  LOC103871444 (bra)  LOC123061158 (tae)  LOC123069782 (tae)  LOC123087020 (tae)  LOC123090939 (tae)  LOC123095970 (tae)  LOC123443613 (hvu)  LOC123447640 (hvu) 
Subcellular
localization
wolf
nucl 5,  cyto 4  (predict for NP_564533.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564533.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 6
ath00190 Oxidative phosphorylation 5
ath04141 Protein processing in endoplasmic reticulum 4
ath04144 Endocytosis 3
ath03050 Proteasome 3
Genes directly connected with AMSH1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.0 ATE1 arginine-tRNA protein transferase 1 [detail] 830454
6.6 SKD1 AAA-type ATPase family protein [detail] 817306
6.3 VPS34 vacuolar protein sorting 34 [detail] 842344
Coexpressed
gene list		 [Coexpressed gene list for AMSH1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256142_at
256142_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256142_at
256142_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256142_at
256142_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841301      
Refseq ID (protein) NP_564533.1 


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