[←][→] ath   At1g48900 Gene
functional annotation
Function   Signal recognition particle, SRP54 subunit protein      
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
KEGG ath03060 [list] [network] Protein export (54 genes)
Protein NP_001077690.1  NP_564535.1 
BLAST NP_001077690.1  NP_564535.1 
Orthologous [Ortholog page] LOC544156 (sly)  AT5G49500 (ath)  ATHSRP54A (ath)  LOC4324712 (osa)  LOC4339274 (osa)  LOC7467986 (ppo)  LOC7487461 (ppo)  LOC11419634 (mtr)  LOC11420996 (mtr)  LOC100789217 (gma)  LOC100792778 (gma)  LOC100811698 (gma)  LOC100815799 (gma)  SRP54 (sly)  LOC103832974 (bra)  LOC103871438 (bra)  LOC103872323 (bra)  LOC112324274 (ppo)  LOC123062012 (tae)  LOC123139386 (tae)  LOC123182564 (tae)  LOC123182565 (tae)  LOC123424800 (hvu)  LOC123447637 (hvu)  LOC123447662 (hvu) 
Subcellular
localization
wolf
cyto 9,  cyto_nucl 5  (predict for NP_001077690.1)
cyto 9  (predict for NP_564535.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001077690.1)
other 7  (predict for NP_564535.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
Genes directly connected with AT1G48900 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.6 RPT6A regulatory particle triple-A ATPase 6A [detail] 832121
8.2 AT1G45000 AAA-type ATPase family protein [detail] 841065
8.0 AT1G43690 ubiquitin interaction motif-containing protein [detail] 840956
7.7 SMU2 RED family protein [detail] 817187
6.9 TAP46 2A phosphatase associated protein of 46 kD [detail] 835379
6.3 DRP3B dynamin related protein [detail] 815898
5.6 NTMC2T4 Calcium-dependent lipid-binding (CaLB domain) family protein [detail] 825277
Coexpressed
gene list		 [Coexpressed gene list for AT1G48900]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246628_at
246628_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246628_at
246628_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246628_at
246628_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841312      
Refseq ID (protein) NP_001077690.1 
NP_564535.1 


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