[←][→] ath   AT1G50410 Gene
functional annotation
Function   SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein  
GO BP
GO:0080188 [list] [network] RNA-directed DNA methylation  (20 genes)  IMP  
GO:0006325 [list] [network] chromatin organization  (338 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
GO:0004386 [list] [network] helicase activity  (157 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001323324.1  NP_001323325.1  NP_001323326.1  NP_564568.1 
BLAST NP_001323324.1  NP_001323325.1  NP_001323326.1  NP_564568.1 
Orthologous [Ortholog page] AT3G16600 (ath)  AT3G20010 (ath)  AT1G11100 (ath)  EDA16 (ath)  LOC4326436 (osa)  LOC4337089 (osa)  LOC4344820 (osa)  LOC7485570 (ppo)  LOC11428547 (mtr)  LOC25485683 (mtr)  LOC100216734 (zma)  LOC100256075 (vvi)  LOC100265351 (vvi)  LOC100792901 (gma)  LOC100795142 (gma)  LOC100802436 (gma)  LOC100805307 (gma)  LOC100811598 (gma)  LOC101243943 (sly)  LOC101251257 (sly)  LOC103636595 (zma)  LOC103642087 (zma)  LOC103829491 (bra)  LOC103830370 (bra)  LOC103859836 (bra)  LOC103869369 (bra)  LOC103871349 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001323324.1)
nucl 9,  chlo 1,  vacu 1  (predict for NP_001323325.1)
nucl 9,  chlo 1,  vacu 1  (predict for NP_001323326.1)
nucl 9,  chlo 1,  vacu 1  (predict for NP_564568.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001323324.1)
other 7,  chlo 5  (predict for NP_001323325.1)
other 7,  chlo 5  (predict for NP_001323326.1)
other 7,  chlo 5  (predict for NP_564568.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with AT1G50410 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 SAC3A SAC3/GANP/Nin1/mts3/eIF-3 p25 family [detail] 818519
6.6 SUA suppressor of abi3-5 [detail] 824590
6.5 TOR target of rapamycin [detail] 841427
Coexpressed
gene list		 [Coexpressed gene list for AT1G50410]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261862_at
261862_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261862_at
261862_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261862_at
261862_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841463      
Refseq ID (protein) NP_001323324.1 
NP_001323325.1 
NP_001323326.1 
NP_564568.1 


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