ATTED-II : GeneID search result

[←][→] ath At1g54350 Gene

functional annotation

Function

ABC transporter family protein

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5004 genes)

HDA ISM

GO MF

GO:0042626 [list] [network] ATPase-coupled transmembrane transporter activity

(192 genes)

ISS

KEGG

Protein

NP_175837.2

BLAST

NP_175837.2

Orthologous

[Ortholog page] LOC4324587 (osa) LOC7464579 (ppo) LOC11445004 (mtr) LOC25483745 (mtr) ABCD2 (sly) LOC102661014 (gma) LOC103869976 (bra) LOC123060692 (tae) LOC123069201 (tae) LOC123077723 (tae) LOC123443127 (hvu)

Subcellular
localization
wolf

chlo 4, plas 4, vacu 1, E.R. 1, pero 1, E.R._vacu 1

(predict for NP_175837.2)

Subcellular
localization
TargetP

chlo 8

(predict for NP_175837.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2
ath00260	Glycine, serine and threonine metabolism	2
ath00630	Glyoxylate and dicarboxylate metabolism	2
ath01200	Carbon metabolism	2

Genes directly connected with ABCD2 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.2	CSK	chloroplast sensor kinase	[detail]	843110
6.0	ARASP	chloroplastic membrane metallo proteases	[detail]	817809
6.0	KEA1	K+ efflux antiporter 1	[detail]	837332
4.9	AT1G55980	FAD/NAD(P)-binding oxidoreductase family protein	[detail]	842049

Coexpressed
gene list

[Coexpressed gene list for ABCD2]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

263000_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

263000_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

263000_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	841876
Refseq ID (protein)	NP_175837.2

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