[←][→] ath   AT1G54500 Gene
functional annotation
Function   Rubredoxin-like superfamily protein  
GO BP
GO:0043448 [list] [network] alkane catabolic process  (1 genes)  IBA  
GO:0010207 [list] [network] photosystem II assembly  (25 genes)  IDA IMP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IBA IDA ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0009055 [list] [network] electron transfer activity  (146 genes)  IBA  
GO:0005506 [list] [network] iron ion binding  (281 genes)  IEA  
KEGG
Protein NP_175852.1 
BLAST NP_175852.1 
Orthologous [Ortholog page] LOC4345270 (osa)  LOC11434194 (mtr)  LOC100259018 (vvi)  LOC100306607 (gma)  LOC101245698 (sly)  LOC103644215 (zma)  LOC103645696 (zma)  LOC103645697 (zma)  LOC103645699 (zma)  LOC103652255 (zma)  LOC103863515 (bra)  LOC109943812 (zma) 
Subcellular
localization
wolf
chlo 4,  mito 1,  golg 1,  nucl 1,  plas 1,  extr 1,  vacu 1,  cyto_mito 1,  nucl_plas 1  (predict for NP_175852.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_175852.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 4
ath00710 Carbon fixation in photosynthetic organisms 2
ath01200 Carbon metabolism 2
Genes directly connected with AT1G54500 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.2 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein [detail] 837996
9.1 FED A 2Fe-2S ferredoxin-like superfamily protein [detail] 842386
8.7 AT2G26500 cytochrome b6f complex subunit (petM) [detail] 817191
7.9 AT1G05140 Peptidase M50 family protein [detail] 839307
7.5 AT3G56010 transmembrane protein [detail] 824767
7.0 AT3G20680 plant/protein (DUF1995) [detail] 821615
Coexpressed
gene list		 [Coexpressed gene list for AT1G54500]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262954_at
262954_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262954_at
262954_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262954_at
262954_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841892      
Refseq ID (protein) NP_175852.1 


The preparation time of this page was 0.2 [sec].