[←][→] ath   AT1G55325 Gene
functional annotation
Function   RNA polymerase II transcription mediator  
GO BP
GO:0090213 [list] [network] regulation of radial pattern formation  (2 genes)  IMP  
GO:0040034 [list] [network] regulation of development, heterochronic  (49 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001185237.1  NP_001322788.1  NP_001322789.1  NP_849809.2 
BLAST NP_001185237.1  NP_001322788.1  NP_001322789.1  NP_849809.2 
Orthologous [Ortholog page] LOC4338949 (osa)  LOC11437356 (mtr)  LOC100263945 (vvi)  LOC100279985 (zma)  LOC100781873 (gma)  LOC100782017 (gma)  LOC101261015 (sly)  LOC103829787 (bra)  LOC103871044 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  mito 1,  pero 1,  cysk 1,  chlo_mito 1,  cyto_pero 1  (predict for NP_001185237.1)
nucl 5,  chlo 3,  cysk_nucl 3  (predict for NP_001322788.1)
nucl 5,  chlo 3,  cysk_nucl 3  (predict for NP_001322789.1)
nucl 5,  chlo 3,  cysk_nucl 3  (predict for NP_849809.2)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for NP_001185237.1)
other 4,  mito 4  (predict for NP_001322788.1)
other 4,  mito 4  (predict for NP_001322789.1)
other 4,  mito 4  (predict for NP_849809.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
Genes directly connected with GCT on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.6 UPL2 ubiquitin-protein ligase 2 [detail] 843368
11.4 UPL1 LOW protein: E3 ubiquitin ligase-like protein [detail] 842036
11.1 AT1G02080 transcription regulator [detail] 839244
Coexpressed
gene list		 [Coexpressed gene list for GCT]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259647_at
259647_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259647_at
259647_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259647_at
259647_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841978      
Refseq ID (protein) NP_001185237.1 
NP_001322788.1 
NP_001322789.1 
NP_849809.2 


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