[←][→] ath   AT1G55520 Gene
functional annotation
Function   TATA binding protein 2  
GO BP
GO:0006352 [list] [network] DNA-templated transcription, initiation  (56 genes)  IDA  
GO:0006366 [list] [network] transcription by RNA polymerase II  (57 genes)  IBA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (19 genes)  IBA  
GO:0005667 [list] [network] transcription factor complex  (106 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM TAS  
GO MF
GO:0000979 [list] [network] RNA polymerase II core promoter sequence-specific DNA binding  (4 genes)  IBA  
GO:0017025 [list] [network] TBP-class protein binding  (17 genes)  ISS  
GO:0000978 [list] [network] RNA polymerase II proximal promoter sequence-specific DNA binding  (34 genes)  IBA  
GO:0008134 [list] [network] transcription factor binding  (173 genes)  IBA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IBA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
Protein NP_001321102.1  NP_001321103.1  NP_175948.1  NP_849812.1 
BLAST NP_001321102.1  NP_001321103.1  NP_175948.1  NP_849812.1 
Orthologous [Ortholog page] LOC542240 (zma)  LOC542241 (zma)  TBP1 (gma)  TBP1 (ath)  LOC4333619 (osa)  LOC4348699 (osa)  LOC4352633 (osa)  LOC7453590 (ppo)  LOC7489675 (ppo)  LOC25491712 (mtr)  LOC25498820 (mtr)  LOC100243302 (vvi)  LOC100790566 (gma)  LOC100804848 (gma)  LOC100810213 (gma)  LOC100810845 (gma)  LOC101254627 (sly)  LOC103829778 (bra)  LOC103832582 (bra)  LOC103870134 (bra) 
Subcellular
localization
wolf
nucl 7,  golg 2  (predict for NP_001321102.1)
nucl 8,  cyto 2  (predict for NP_001321103.1)
nucl 8,  cyto 2  (predict for NP_175948.1)
nucl 8,  cyto 2  (predict for NP_849812.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001321102.1)
other 9  (predict for NP_001321103.1)
other 9  (predict for NP_175948.1)
other 9  (predict for NP_849812.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
Genes directly connected with TBP2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 TBP1 TATA binding protein 1 [detail] 820546
6.8 NF-YB12 nuclear factor Y, subunit B12 [detail] 830715
5.9 SYP81 syntaxin of plants 81 [detail] 841599
4.5 AT5G13240 transcription regulator [detail] 831164
Coexpressed
gene list		 [Coexpressed gene list for TBP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265071_at
265071_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265071_at
265071_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265071_at
265071_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841999      
Refseq ID (protein) NP_001321102.1 
NP_001321103.1 
NP_175948.1 
NP_849812.1 


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