[←][→] ath   AT1G55860 Gene
functional annotation
Function   LOW protein: E3 ubiquitin ligase-like protein  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA IEA ISS  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  ISS TAS  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA RCA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IDA IMP ISS  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001185245.1 
BLAST NP_001185245.1 
Orthologous [Ortholog page] UPL2 (ath)  LOC4346522 (osa)  LOC25493427 (mtr)  LOC25493428 (mtr)  LOC100246297 (vvi)  LOC100304346 (zma)  LOC100801545 (gma)  LOC100819012 (gma)  LOC101249744 (sly)  LOC103871016 (bra) 
Subcellular
localization
wolf
plas 6,  mito 2,  nucl 1,  pero 1  (predict for NP_001185245.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001185245.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with UPL1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
21.5 UPL2 ubiquitin-protein ligase 2 [detail] 843368
17.0 AT1G48090 calcium-dependent lipid-binding family protein [detail] 841226
16.8 BIG auxin transport protein (BIG) [detail] 820398
16.6 SYD P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817375
16.5 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein [detail] 832375
12.1 AT2G45540 WD-40 repeat family protein / beige-like protein [detail] 819162
11.6 WAVE5 SCAR family protein [detail] 827594
11.4 GCT RNA polymerase II transcription mediator [detail] 841978
11.1 EFS histone-lysine N-methyltransferase [detail] 844066
11.1 SAB HYPERSENSITIVE TO PI STARVATION 4 [detail] 842193
10.6 AT2G03140 alpha/beta-Hydrolases superfamily protein [detail] 814843
10.3 DEK1 calpain-type cysteine protease family [detail] 841981
10.0 AT3G24870 Helicase/SANT-associated, DNA binding protein [detail] 822085
9.9 AT2G25320 TRAF-like family protein [detail] 817070
9.9 GSL03 glucan synthase-like 3 [detail] 817755
9.3 UBP12 ubiquitin-specific protease 12 [detail] 830548
8.0 PEX1 peroxisome 1 [detail] 830746
7.7 AT5G06120 ARM repeat superfamily protein [detail] 830499
6.0 AT3G14460 LRR and NB-ARC domains-containing disease resistance protein [detail] 820669
Coexpressed
gene list		 [Coexpressed gene list for UPL1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 842036      
Refseq ID (protein) NP_001185245.1 


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