[←][→] ath   At1g55860 Gene
functional annotation
Function   LOW protein: E3 ubiquitin ligase-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (230 genes)  TAS  
GO:0016567 [list] [network] protein ubiquitination  (434 genes)  ISS  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (189 genes)  ISS TAS  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (261 genes)  IDA IMP ISS  
KEGG
Protein NP_001185245.1 
BLAST NP_001185245.1 
Orthologous [Ortholog page] UPL2 (ath)  LOC4346522 (osa)  LOC18095379 (ppo)  LOC18103282 (ppo)  LOC25493427 (mtr)  LOC25493428 (mtr)  LOC100801545 (gma)  LOC100819012 (gma)  LOC101249744 (sly)  LOC103871016 (bra) 
Subcellular
localization
wolf
plas 6,  mito 2,  nucl 1,  pero 1  (predict for NP_001185245.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001185245.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with UPL1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
18.9 UPL2 ubiquitin-protein ligase 2 [detail] 843368
15.1 BIG auxin transport protein (BIG) [detail] 820398
14.8 SDG2 SET domain protein 2 [detail] 827183
9.5 AT4G31570 nucleoporin [detail] 829284
7.7 AT4G39420 spatacsin carboxy-terminus protein [detail] 830097
Coexpressed
gene list		 [Coexpressed gene list for UPL1]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 842036      
Refseq ID (protein) NP_001185245.1 


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