ATTED-II : GeneID search result

[←][→] ath AT1G62660 Gene

functional annotation

Function

Glycosyl hydrolases family 32 protein

GO BP

GO:0005985 [list] [network] sucrose metabolic process	(44 genes)	IEA
GO:0071370 [list] [network] cellular response to gibberellin stimulus	(78 genes)	IEP
GO:0009738 [list] [network] abscisic acid-activated signaling pathway	(194 genes)	IEA
GO:0009414 [list] [network] response to water deprivation	(361 genes)	IEP
GO:0009617 [list] [network] response to bacterium	(479 genes)	IEP
GO:0009651 [list] [network] response to salt stress	(485 genes)	IEP
GO:0009737 [list] [network] response to abscisic acid	(574 genes)	IEP

GO CC

GO:0005775 [list] [network] vacuolar lumen	(5 genes)	IEA
GO:0000325 [list] [network] plant-type vacuole	(169 genes)	IDA
GO:0005773 [list] [network] vacuole	(1133 genes)	IDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0016020 [list] [network] membrane	(7839 genes)	HDA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0004575 [list] [network] sucrose alpha-glucosidase activity

(12 genes)

IEA

KEGG

ath00052 [list] [network] Galactose metabolism (57 genes)

ath00500 [list] [network] Starch and sucrose metabolism (165 genes)

Protein

NP_001323301.1 NP_001323302.1 NP_001323303.1 NP_564798.1

BLAST

NP_001323301.1 NP_001323302.1 NP_001323303.1 NP_564798.1

Orthologous

[Ortholog page] LOC542324 (zma) AI (sly) lin9 (sly) ATBETAFRUCT4 (ath) LOC4328018 (osa) LOC4336515 (osa) LOC7465525 (ppo) LOC11422963 (mtr) LOC11426345 (mtr) LOC100241232 (vvi) LOC100256970 (vvi) LOC100383472 (zma) LOC100788844 (gma) LOC100798772 (gma) LOC100799487 (gma) LOC100805757 (gma) LOC100810057 (gma) LOC100814788 (gma) LOC100819161 (gma) LOC103654990 (zma) LOC103838037 (bra) LOC103838379 (bra) LOC103843145 (bra) LOC103872021 (bra) LOC109943123 (zma)

Subcellular
localization
wolf

cyto 4, chlo 3, nucl 1, chlo_mito 1	(predict for NP_001323301.1)
cyto 6, nucl 1, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for NP_001323302.1)
cyto 6, nucl 1, chlo 1, plas 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1	(predict for NP_001323303.1)
nucl 3, plas 2, vacu 1, E.R. 1, E.R._vacu 1, cysk_plas 1, cyto_plas 1	(predict for NP_564798.1)

Subcellular
localization
TargetP

scret 4, other 3	(predict for NP_001323301.1)
other 8	(predict for NP_001323302.1)
other 8	(predict for NP_001323303.1)
other 8, chlo 4	(predict for NP_564798.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	3
ath00052	Galactose metabolism	2

Genes directly connected with AT1G62660 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.0	VHA-E3	vacuolar H+-ATPase subunit E	[detail]	842725
6.2	JAL34	Mannose-binding lectin superfamily protein	[detail]	820894
5.8	ATBETAFRUCT4	Glycosyl hydrolases family 32 protein	[detail]	837777
4.3	SWEET17	Nodulin MtN3 family protein	[detail]	827274
4.2	NSH3	inosine-uridine preferring nucleoside hydrolase family protein	[detail]	832004

Coexpressed
gene list

[Coexpressed gene list for AT1G62660]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

265118_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

265118_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

265118_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842563
Refseq ID (protein)	NP_001323301.1
	NP_001323302.1
	NP_001323303.1
	NP_564798.1

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