[←][→] ath   AT1G66260 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0051028 [list] [network] mRNA transport  (63 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
KEGG ath03013 [list] [network] RNA transport (171 genes)
ath03015 [list] [network] mRNA surveillance pathway (115 genes)
ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001185329.1  NP_564871.1 
BLAST NP_001185329.1  NP_564871.1 
Orthologous [Ortholog page] ALY4 (ath)  LOC4340675 (osa)  LOC4345621 (osa)  LOC11406653 (mtr)  LOC100257009 (vvi)  LOC100280157 (zma)  LOC100280336 (zma)  LOC100801491 (gma)  LOC100820344 (gma)  LOC101256343 (sly)  LOC101268859 (sly)  LOC103831096 (bra)  LOC103863747 (bra) 
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_001185329.1)
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_564871.1)
Subcellular
localization
TargetP
other 6,  chlo 6  (predict for NP_001185329.1)
other 6,  chlo 6  (predict for NP_564871.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath04130 SNARE interactions in vesicular transport 2
ath03013 RNA transport 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT1G66260 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 SYP42 syntaxin of plants 42 [detail] 827505
5.1 ALY4 ALWAYS EARLY 4 [detail] 833750
5.0 AtRZ-1c RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [detail] 830307
Coexpressed
gene list		 [Coexpressed gene list for AT1G66260]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259825_at
259825_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259825_at
259825_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259825_at
259825_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842943      
Refseq ID (protein) NP_001185329.1 
NP_564871.1 


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