[←][→] ath   At1g66260 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein      
GO BP
GO:0006364 [list] [network] rRNA processing  (169 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG ath03013 [list] [network] Nucleocytoplasmic transport (103 genes)
ath03015 [list] [network] mRNA surveillance pathway (119 genes)
ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001185329.1  NP_564871.1 
BLAST NP_001185329.1  NP_564871.1 
Orthologous [Ortholog page] ALY4 (ath)  LOC4345621 (osa)  LOC7493558 (ppo)  LOC11406653 (mtr)  LOC18106636 (ppo)  LOC100801491 (gma)  LOC100820344 (gma)  LOC101256343 (sly)  LOC101268859 (sly)  LOC103831096 (bra)  LOC103863747 (bra)  LOC123043365 (tae)  LOC123051222 (tae)  LOC123187182 (tae)  LOC123424545 (hvu) 
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_001185329.1)
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_564871.1)
Subcellular
localization
TargetP
other 6,  chlo 6  (predict for NP_001185329.1)
other 6,  chlo 6  (predict for NP_564871.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
ath03015 mRNA surveillance pathway 2
ath04130 SNARE interactions in vesicular transport 2
Genes directly connected with AT1G66260 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.8 SYP42 syntaxin of plants 42 [detail] 827505
5.8 FC2 LAMMER-type protein kinase AFC2 [detail] 828576
5.8 AT3G52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein [detail] 824376
Coexpressed
gene list		 [Coexpressed gene list for AT1G66260]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259825_at
259825_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259825_at
259825_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259825_at
259825_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842943      
Refseq ID (protein) NP_001185329.1 
NP_564871.1 


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