[←][→] ath   AT1G77180 Gene
functional annotation
Function   chromatin protein family  
GO BP
GO:0010555 [list] [network] response to mannitol  (18 genes)  IEP  
GO:0042752 [list] [network] regulation of circadian rhythm  (57 genes)  IGI  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (63 genes)  IMP  
GO:0048511 [list] [network] rhythmic process  (131 genes)  IEA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IPI  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (173 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (272 genes)  IMP ISS  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IDA  
GO:0009737 [list] [network] response to abscisic acid  (574 genes)  IEP  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0036002 [list] [network] pre-mRNA binding  (19 genes)  IPI  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001031291.1  NP_001185416.1  NP_565151.1 
BLAST NP_001031291.1  NP_001185416.1  NP_565151.1 
Orthologous [Ortholog page] LOC732608 (gma)  LOC4330796 (osa)  LOC7488937 (ppo)  LOC11415940 (mtr)  LOC100245841 (vvi)  LOC100286002 (zma)  LOC101256945 (sly)  LOC103832171 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001031291.1)
nucl 9,  cyto_nucl 5  (predict for NP_001185416.1)
nucl 9,  cyto_nucl 5  (predict for NP_565151.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031291.1)
other 8  (predict for NP_001185416.1)
other 8  (predict for NP_565151.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with SKIP on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.4 CDC5 cell division cycle 5 [detail] 837506
10.1 AT1G11480 eukaryotic translation initiation factor-like protein [detail] 837691
9.7 RCY1 arginine-rich cyclin 1 [detail] 817183
9.2 AT4G01000 Ubiquitin-like superfamily protein [detail] 826414
8.1 AT2G45620 Nucleotidyltransferase family protein [detail] 819170
7.9 AT3G09850 D111/G-patch domain-containing protein [detail] 820143
7.7 AT5G12120 Ubiquitin-associated/translation elongation factor EF1B protein [detail] 831085
5.6 AT1G09320 agenet domain-containing protein [detail] 837453
Coexpressed
gene list		 [Coexpressed gene list for SKIP]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264486_at
264486_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264486_at
264486_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264486_at
264486_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844055      
Refseq ID (protein) NP_001031291.1 
NP_001185416.1 
NP_565151.1 


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