[←][→] ath   AT1G79860 Gene
functional annotation
Function   RHO guanyl-nucleotide exchange factor 12  
GO BP
GO:0080092 [list] [network] regulation of pollen tube growth  (36 genes)  IGI  
GO:0009860 [list] [network] pollen tube growth  (129 genes)  IEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IMP  
GO CC
GO:0090406 [list] [network] pollen tube  (80 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0005089 [list] [network] Rho guanyl-nucleotide exchange factor activity  (16 genes)  IBA ISS  
KEGG
Protein NP_178104.1 
BLAST NP_178104.1 
Orthologous [Ortholog page] KPP (sly)  ROPGEF8 (ath)  ROPGEF9 (ath)  ROPGEF11 (ath)  LOC4325510 (osa)  LOC4328986 (osa)  LOC4339594 (osa)  LOC7470557 (ppo)  LOC7478400 (ppo)  LOC11432219 (mtr)  LOC11442005 (mtr)  LOC25491404 (mtr)  LOC100191433 (zma)  LOC100216854 (zma)  LOC100260990 (vvi)  LOC100261758 (vvi)  LOC100281770 (zma)  LOC100777496 (gma)  LOC100778231 (gma)  LOC100781787 (gma)  LOC100787455 (gma)  LOC101243725 (sly)  LOC101248400 (sly)  LOC101251652 (sly)  LOC101268846 (sly)  LOC103626931 (zma)  LOC103828612 (bra)  LOC103830404 (bra)  LOC103838019 (bra)  LOC103860246 (bra)  LOC103868516 (bra)  LOC103871225 (bra)  LOC112998793 (gma) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 3,  cysk 1,  plas 1,  golg 1,  golg_plas 1  (predict for NP_178104.1)
Subcellular
localization
TargetP
other 5  (predict for NP_178104.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ROPGEF12 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.4 PPa3 pyrophosphorylase 3 [detail] 819299
10.1 XTH13 xyloglucan endotransglucosylase/hydrolase 13 [detail] 835858
9.6 AT2G41970 Protein kinase superfamily protein [detail] 818797
9.2 AT5G18910 Protein kinase superfamily protein [detail] 832009
9.0 ACA9 autoinhibited Ca(2+)-ATPase 9 [detail] 821671
7.9 RIC1 ROP-interactive CRIB motif-containing protein 1 [detail] 817911
7.1 SYP131 syntaxin of plants 131 [detail] 821141
3.2 AT4G34380 Transducin/WD40 repeat-like superfamily protein [detail] 829588
Coexpressed
gene list		 [Coexpressed gene list for ROPGEF12]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260161_at
260161_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260161_at
260161_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260161_at
260161_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844325      
Refseq ID (protein) NP_178104.1 


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