[][] ath   AT2G02720 Gene
functional annotation
Function   Pectate lyase family protein
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (24 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  ISS  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_178375.1 
BLAST NP_178375.1 
Orthologous [Ortholog page] LOC542245 (zma)AT3G01270 (ath)AT5G15110 (ath)AT59 (ath)LOC4328714 (osa)LOC4340099 (osa)LOC4340103 (osa)LOC4340105 (osa)LOC4341389 (osa)LOC7457856 (ppo)LOC7472610 (ppo)LOC7495953 (ppo)LOC11406962 (mtr)LOC11416043 (mtr)LOC11438708 (mtr)LOC25495277 (mtr)LOC25502784 (mtr)LOC100254377 (vvi)LOC100257069 (vvi)LOC100262177 (vvi)LOC100267345 (vvi)LOC100284055 (zma)LOC100284356 (zma)LOC100780236 (gma)LOC100785801 (gma)LOC100796307 (gma)LOC100798579 (gma)LOC100801864 (gma)LOC100810615 (gma)LOC100810857 (gma)LOC101246909 (sly)LOC101249735 (sly)LOC101250914 (sly)LAT59 (sly)LOC101260096 (sly)LOC101264694 (sly)LOC103827511 (bra)LOC103836073 (bra)LOC103839439 (bra)LOC103842969 (bra)LOC103846441 (bra)LOC103850082 (bra)LOC103850968 (bra)LOC103853982 (bra)LOC103856110 (bra)LOC103858923 (bra)LOC103872235 (bra)LOC107275230 (zma)
Subcellular
localization
wolf
cyto 3,  extr 3,  vacu 1,  cyto_pero 1,  chlo 1,  nucl 1,  E.R. 1,  mito_plas 1  (predict for NP_178375.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_178375.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 4
Genes directly connected with AT2G02720 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.5 AT5G48140 Pectin lyase-like superfamily protein [detail] 834866
8.6 AT3G07820 Pectin lyase-like superfamily protein [detail] 819973
8.1 AT1G35490 bZIP family transcription factor [detail] 840442
6.6 AT4G39110 Malectin/receptor-like protein kinase family protein [detail] 830066
6.6 AT5G54095 proteoglycan-like protein [detail] 835496
6.1 CPK17 calcium-dependent protein kinase 17 [detail] 831091
4.4 TPS14 terpene synthase 14 [detail] 842465
4.3 AT4G02650 ENTH/ANTH/VHS superfamily protein [detail] 828212
Coexpressed
gene list
[Coexpressed gene list for AT2G02720]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267476_at
267476_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267476_at
267476_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
267476_at
267476_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 814801    
Refseq ID (protein) NP_178375.1 


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