[←][→] ath   AT2G04400 Gene
functional annotation
Function   Aldolase-type TIM barrel family protein  
GO BP
GO:0000162 [list] [network] tryptophan biosynthetic process  (22 genes)  IBA IEA TAS  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM ISS  
GO MF
GO:0004425 [list] [network] indole-3-glycerol-phosphate synthase activity  (1 genes)  IBA IGI  
GO:0004640 [list] [network] phosphoribosylanthranilate isomerase activity  (4 genes)  IBA  
GO:0005507 [list] [network] copper ion binding  (185 genes)  IDA  
KEGG ath00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (56 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_178521.1 
BLAST NP_178521.1 
Orthologous [Ortholog page] LOC103860298 (bra) 
Subcellular
localization
wolf
chlo 9  (predict for NP_178521.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_178521.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 11
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath00260 Glycine, serine and threonine metabolism 6
ath00270 Cysteine and methionine metabolism 4
ath00380 Tryptophan metabolism 4
Genes directly connected with AT2G04400 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
17.0 TSA1 tryptophan synthase alpha chain [detail] 824629
13.9 YLS5 Class I glutamine amidotransferase-like superfamily protein [detail] 818470
13.3 CYP83B1 cytochrome P450, family 83, subfamily B, polypeptide 1 [detail] 829277
13.0 TRP1 tryptophan biosynthesis 1 [detail] 831666
11.7 ASA1 anthranilate synthase alpha subunit 1 [detail] 830457
8.5 PSAT phosphoserine aminotransferase [detail] 829715
8.2 DHS1 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 [detail] 830159
7.6 ASB1 anthranilate synthase beta subunit 1 [detail] 839103
Coexpressed
gene list		 [Coexpressed gene list for AT2G04400]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263807_at
263807_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263807_at
263807_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263807_at
263807_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814980      
Refseq ID (protein) NP_178521.1 


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