[←][→] ath   At2g19830 Gene
functional annotation
Function   SNF7 family protein      
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (261 genes)  ISS  
GO CC
GO:0000815 [list] [network] ESCRT III complex  (9 genes)  ISS  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03250 [list] [network] Viral life cycle - HIV-1 (39 genes)
ath04144 [list] [network] Endocytosis (158 genes)
Protein NP_001318249.1  NP_179573.1 
BLAST NP_001318249.1  NP_179573.1 
Orthologous [Ortholog page] SNF7.1 (ath)  LOC4341494 (osa)  LOC4346566 (osa)  LOC11409610 (mtr)  LOC11413678 (mtr)  LOC18100390 (ppo)  LOC18107661 (ppo)  LOC25497002 (mtr)  LOC100780154 (gma)  LOC100789724 (gma)  LOC100792607 (gma)  LOC100810464 (gma)  LOC101248169 (sly)  LOC101264627 (sly)  LOC101268300 (sly)  LOC103828275 (bra)  LOC103837985 (bra)  LOC103853808 (bra)  LOC103861874 (bra)  LOC123103388 (tae)  LOC123111589 (tae)  LOC123120947 (tae)  LOC123156192 (tae)  LOC123407204 (hvu)  LOC123452615 (hvu) 
Subcellular
localization
wolf
cyto 3,  nucl 2,  cyto_E.R. 2,  chlo 1,  mito 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001318249.1)
nucl 4,  nucl_plas 3,  chlo 2,  cyto 2,  mito 1  (predict for NP_179573.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001318249.1)
other 7  (predict for NP_179573.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath04120 Ubiquitin mediated proteolysis 2
ath04130 SNARE interactions in vesicular transport 2
ath04145 Phagosome 2
ath00190 Oxidative phosphorylation 2
Genes directly connected with SNF7.2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.1 RABG3E RAB GTPase homolog G3E [detail] 841353
6.8 RCE1 RUB1 conjugating enzyme 1 [detail] 829833
6.5 UBC34 ubiquitin-conjugating enzyme 34 [detail] 838300
6.1 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein [detail] 840134
5.3 AT3G07940 Calcium-dependent ARF-type GTPase activating protein family [detail] 819985
Coexpressed
gene list		 [Coexpressed gene list for SNF7.2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266698_at
266698_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266698_at
266698_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266698_at
266698_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816502      
Refseq ID (protein) NP_001318249.1 
NP_179573.1 


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