[←][→] ath   AT2G39720 Gene
functional annotation
Function   RING-H2 finger C2A  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IBA IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001318385.1  NP_030517.1 
BLAST NP_001318385.1  NP_030517.1 
Orthologous [Ortholog page] RDUF1 (ath)  RDUF2 (ath)  LOC4332393 (osa)  LOC4337586 (osa)  LOC7454941 (ppo)  LOC7468627 (ppo)  LOC7485690 (ppo)  LOC7487968 (ppo)  LOC7490384 (ppo)  LOC11414430 (mtr)  LOC11419123 (mtr)  LOC11433768 (mtr)  LOC25489325 (mtr)  LOC100216907 (zma)  LOC100244277 (vvi)  LOC100256404 (vvi)  LOC100265659 (vvi)  LOC100778994 (gma)  LOC100784364 (gma)  LOC100784822 (gma)  LOC100789228 (gma)  LOC100792020 (gma)  LOC100792874 (gma)  LOC100798563 (gma)  LOC100804867 (gma)  LOC100807324 (gma)  LOC101256865 (sly)  LOC101256882 (sly)  LOC103637322 (zma)  LOC103639315 (zma)  LOC103845376 (bra)  LOC103851573 (bra)  LOC103856624 (bra)  LOC103857876 (bra)  LOC103861302 (bra)  LOC103867017 (bra)  LOC106796723 (gma)  LOC107546767 (zma) 
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  mito 2,  cyto 1,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001318385.1)
nucl 4,  cyto_nucl 3,  mito 2,  cyto 1,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_030517.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001318385.1)
other 4  (predict for NP_030517.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RHC2A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT2G37035 transmembrane protein [detail] 818279
7.5 AT3G19950 RING/U-box superfamily protein [detail] 821533
7.1 ELC-Like ELCH-like protein [detail] 831232
6.6 BPM1 BTB-POZ and MATH domain 1 [detail] 832018
6.1 AT5G58020 RTF2 RING-finger protein [detail] 835914
5.9 AT3G15040 senescence regulator (Protein of unknown function, DUF584) [detail] 820733
5.1 GAE2 UDP-D-glucuronate 4-epimerase 2 [detail] 839289
Coexpressed
gene list		 [Coexpressed gene list for RHC2A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245059_at
245059_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245059_at
245059_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245059_at
245059_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818556      
Refseq ID (protein) NP_001318385.1 
NP_030517.1 


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