ATTED-II : GeneID search result

[←][→] ath AT2G40770 Gene

functional annotation

Function

RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

ISM

GO MF

KEGG

Protein

NP_001318395.1 NP_001325178.1 NP_181609.4

BLAST

NP_001318395.1 NP_001325178.1 NP_181609.4

Orthologous

[Ortholog page] LOC4344297 (osa) LOC11410582 (mtr) LOC100248506 (vvi) LOC100776659 (gma) LOC101254366 (sly) LOC103633565 (zma) LOC103865835 (bra)

Subcellular
localization
wolf

nucl 3, mito 2, chlo 2, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for NP_001318395.1)
nucl 3, mito 2, chlo 2, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for NP_001325178.1)
nucl 3, mito 2, chlo 2, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for NP_181609.4)

Subcellular
localization
TargetP

mito 6	(predict for NP_001318395.1)
mito 6	(predict for NP_001325178.1)
mito 6	(predict for NP_181609.4)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	RNA transport	2

Genes directly connected with AT2G40770 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.9	SDG2	SET domain protein 2	[detail]	827183
8.1	EMB2773	PHD finger family protein	[detail]	831407
7.9	THO2	THO2	[detail]	839081

Coexpressed
gene list

[Coexpressed gene list for AT2G40770]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

266050_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

266050_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

266050_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818674
Refseq ID (protein)	NP_001318395.1
	NP_001325178.1
	NP_181609.4

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