ATTED-II : GeneID search result

[←][→] ath At2g43770 Gene

functional annotation

Function

Transducin/WD40 repeat-like superfamily protein

GO BP

GO:0006397 [list] [network] mRNA processing	(183 genes)	IEA
GO:0008380 [list] [network] RNA splicing	(191 genes)	IEA

GO CC

GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex	(121 genes)	ISS
GO:0005829 [list] [network] cytosol	(2559 genes)	HDA
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM

GO MF

KEGG

ath03040 [list] [network] Spliceosome (203 genes)

Protein

NP_181905.1

BLAST

NP_181905.1

Orthologous

[Ortholog page] LOC4341706 (osa) LOC11428985 (mtr) LOC100789793 (gma) LOC100803276 (gma) WDR57 (sly) LOC103830226 (bra) LOC103866741 (bra) LOC112325249 (ppo) LOC123149413 (tae) LOC123158104 (tae) LOC123165887 (tae) LOC123407040 (hvu)

Subcellular
localization
wolf

cyto 4, nucl 2, cyto_E.R. 2, pero 1, cysk_nucl 1, nucl_plas 1

(predict for NP_181905.1)

Subcellular
localization
TargetP

chlo 6, other 6

(predict for NP_181905.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2

Genes directly connected with AT2G43770 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
8.7	PHB6	prohibitin 6	[detail]	816575
7.7	AT5G19350	RNA-binding (RRM/RBD/RNP motifs) family protein	[detail]	832055
7.4	AT5G62290	nucleotide-sensitive chloride conductance regulator (ICln) family protein	[detail]	836350

Coexpressed
gene list

[Coexpressed gene list for AT2G43770]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260606_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260606_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260606_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	818980
Refseq ID (protein)	NP_181905.1

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