[←][→] ath   AT2G43870 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_181915.1 
BLAST NP_181915.1 
Orthologous [Ortholog page] TAPG1 (sly)  TAPG4 (sly)  TAPG2 (sly)  AT2G43880 (ath)  AT2G43890 (ath)  AT3G59850 (ath)  AT1G05650 (ath)  AT1G05660 (ath)  LOC4326679 (osa)  LOC7464588 (ppo)  LOC7465609 (ppo)  LOC7469534 (ppo)  LOC7469535 (ppo)  LOC11411658 (mtr)  LOC11440395 (mtr)  LOC25500179 (mtr)  LOC100242164 (vvi)  LOC100250754 (vvi)  LOC100273291 (zma)  LOC100782500 (gma)  LOC100784002 (gma)  LOC100785701 (gma)  LOC100786608 (gma)  LOC100789818 (gma)  LOC100793088 (gma)  LOC100797183 (gma)  LOC100806846 (gma)  LOC100854108 (vvi)  TAPG5 (sly)  LOC101249666 (sly)  LOC101249943 (sly)  LOC101252557 (sly)  LOC101259412 (sly)  TPG7 (sly)  LOC101260614 (sly)  LOC101264596 (sly)  LOC101264897 (sly)  LOC101265207 (sly)  TPG6 (sly)  LOC103836520 (bra)  LOC103841831 (bra)  LOC103844104 (bra)  LOC103849973 (bra)  LOC103858105 (bra)  LOC103866111 (bra)  LOC103866112 (bra)  LOC103866113 (bra)  LOC103866751 (bra)  LOC103866752 (bra)  LOC103866753 (bra)  LOC104878208 (vvi)  LOC104878209 (vvi) 
Subcellular
localization
wolf
extr 3,  vacu 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_181915.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_181915.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 6
Genes directly connected with AT2G43870 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT1G54890 Late embryogenesis abundant (LEA) protein-like protein [detail] 841928
5.5 WAG2 Protein kinase superfamily protein [detail] 820658
4.7 AT3G59850 Pectin lyase-like superfamily protein [detail] 825155
Coexpressed
gene list		 [Coexpressed gene list for AT2G43870]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260608_at
260608_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260608_at
260608_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260608_at
260608_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 818991      
Refseq ID (protein) NP_181915.1 


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