[←][→] ath   AT2G44350 Gene
functional annotation
Function   Citrate synthase family protein  
GO BP
GO:0006101 [list] [network] citrate metabolic process  (6 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (54 genes)  IBA IEA TAS  
GO:0046686 [list] [network] response to cadmium ion  (346 genes)  IEP  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IBA  
GO CC
GO:0005759 [list] [network] mitochondrial matrix  (143 genes)  IBA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  RCA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA IDA ISM TAS  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO MF
GO:0004108 [list] [network] citrate (Si)-synthase activity  (5 genes)  IBA IDA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IDA  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)
ath00630 [list] [network] Glyoxylate and dicarboxylate metabolism (78 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
Protein NP_001324514.1  NP_001324515.1  NP_566016.1  NP_850415.1 
BLAST NP_001324514.1  NP_001324515.1  NP_566016.1  NP_850415.1 
Orthologous [Ortholog page] CSY5 (ath)  LOC4328598 (osa)  LOC4350660 (osa)  LOC25486862 (mtr)  LOC100194338 (zma)  LOC100261432 (vvi)  LOC100279573 (zma)  LOC100280203 (zma)  LOC100499624 (gma)  LOC100781418 (gma)  LOC101249011 (sly)  LOC103858130 (bra)  LOC103862913 (bra)  LOC103866133 (bra) 
Subcellular
localization
wolf
mito 6,  cyto_mito 4,  chlo 2  (predict for NP_001324514.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for NP_001324515.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for NP_566016.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for NP_850415.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001324514.1)
mito 8  (predict for NP_001324515.1)
mito 8  (predict for NP_566016.1)
mito 8  (predict for NP_850415.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 9
ath00020 Citrate cycle (TCA cycle) 5
ath01200 Carbon metabolism 5
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 2
Genes directly connected with ATCS on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.6 MPPBETA Insulinase (Peptidase family M16) protein [detail] 821084
9.0 AT1G51980 Insulinase (Peptidase family M16) protein [detail] 841627
8.9 ACO2 aconitase 2 [detail] 828805
8.2 AT5G55070 Dihydrolipoamide succinyltransferase [detail] 835598
8.1 SDH1-1 succinate dehydrogenase 1-1 [detail] 836809
7.8 mtLPD2 lipoamide dehydrogenase 2 [detail] 820984
6.8 AT5G17380 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein [detail] 831604
6.4 AUD1 NAD(P)-binding Rossmann-fold superfamily protein [detail] 825458
6.0 GPT1 glucose 6-phosphate/phosphate translocator 1 [detail] 835570
5.1 PIRL9 plant intracellular ras group-related LRR 9 [detail] 820306
5.1 FMO GS-OX5 flavin-monooxygenase glucosinolate S-oxygenase 5 [detail] 837766
Coexpressed
gene list		 [Coexpressed gene list for ATCS]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267368_at
267368_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267368_at
267368_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267368_at
267368_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819042      
Refseq ID (protein) NP_001324514.1 
NP_001324515.1 
NP_566016.1 
NP_850415.1 


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