[←][→] ath   AT2G45890 Gene
functional annotation
Function   RHO guanyl-nucleotide exchange factor 4  
GO BP
GO:0009817 [list] [network] defense response to fungus, incompatible interaction  (50 genes)  IMP  
GO:0048767 [list] [network] root hair elongation  (66 genes)  IMP  
GO:0009664 [list] [network] plant-type cell wall organization  (145 genes)  IMP  
GO CC
GO:0009531 [list] [network] secondary cell wall  (18 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA  
GO MF
GO:0005089 [list] [network] Rho guanyl-nucleotide exchange factor activity  (16 genes)  IBA ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_182113.2 
BLAST NP_182113.2 
Orthologous [Ortholog page] ROPGEF3 (ath)  ROPGEF2 (ath)  LOC4336643 (osa)  LOC4343233 (osa)  LOC4349314 (osa)  LOC7496968 (ppo)  LOC11436941 (mtr)  LOC25500877 (mtr)  LOC100191669 (zma)  LOC100246463 (vvi)  LOC100382507 (zma)  LOC100785956 (gma)  LOC100789051 (gma)  LOC100806086 (gma)  LOC100811579 (gma)  LOC101255922 (sly)  LOC103633172 (zma)  LOC103836917 (bra)  LOC103858869 (bra)  LOC103866931 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 2,  cysk 1  (predict for NP_182113.2)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_182113.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ROPGEF4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 GXM2 glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [detail] 826590
7.4 AT1G08340 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein [detail] 837354
6.6 PERK13 root hair specific 10 [detail] 843382
Coexpressed
gene list		 [Coexpressed gene list for ROPGEF4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266913_at
266913_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266913_at
266913_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266913_at
266913_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 819197      
Refseq ID (protein) NP_182113.2 


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