[←][→] ath   AT3G02540 Gene
functional annotation
Function   Rad23 UV excision repair protein family  
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (46 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0070628 [list] [network] proteasome binding  (16 genes)  IDA  
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (23 genes)  IDA  
GO:0003684 [list] [network] damaged DNA binding  (40 genes)  IEA  
GO:0043130 [list] [network] ubiquitin binding  (51 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03420 [list] [network] Nucleotide excision repair (69 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001189793.1  NP_186903.1  NP_974211.1 
BLAST NP_001189793.1  NP_186903.1  NP_974211.1 
Orthologous [Ortholog page] RAD23D (ath)  LOC4340699 (osa)  LOC4345632 (osa)  LOC4347014 (osa)  LOC7477421 (ppo)  LOC7488352 (ppo)  LOC25485511 (mtr)  LOC25499820 (mtr)  LOC100191313 (zma)  LOC100244610 (vvi)  LOC100245820 (vvi)  LOC100274222 (zma)  LOC100282762 (zma)  LOC100809066 (gma)  LOC100814162 (gma)  LOC100817821 (gma)  LOC100818012 (gma)  RAD23d (sly)  LOC101249452 (sly)  LOC101258124 (sly)  LOC103850114 (bra)  LOC103858967 (bra)  LOC103863786 (bra) 
Subcellular
localization
wolf
cyto 6,  mito 1,  nucl 1,  chlo_mito 1,  nucl_plas 1  (predict for NP_001189793.1)
cyto 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_186903.1)
cyto 5,  mito 3,  nucl_plas 1,  nucl 1,  plas 1  (predict for NP_974211.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001189793.1)
other 9  (predict for NP_186903.1)
other 9  (predict for NP_974211.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 6
ath01200 Carbon metabolism 6
ath00010 Glycolysis / Gluconeogenesis 5
ath00020 Citrate cycle (TCA cycle) 3
ath01230 Biosynthesis of amino acids 3
Genes directly connected with RAD23C on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.3 AT4G32760 ENTH/VHS/GAT family protein [detail] 829412
6.0 PKP-ALPHA Pyruvate kinase family protein [detail] 821870
5.3 CAC3 acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit [detail] 818382
4.1 TIFY8 TIFY domain protein 8 [detail] 829392
Coexpressed
gene list		 [Coexpressed gene list for RAD23C]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
258499_at
258499_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
258499_at
258499_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
258499_at
258499_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 821195      
Refseq ID (protein) NP_001189793.1 
NP_186903.1 
NP_974211.1 


The preparation time of this page was 0.2 [sec].