ATTED-II : GeneID search result

[←][→] ath AT3G05950 Gene

functional annotation

Function

RmlC-like cupins superfamily protein

GO BP

GO CC

GO:0048046 [list] [network] apoplast	(443 genes)	IEA
GO:0005618 [list] [network] cell wall	(685 genes)	IBA
GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM

GO MF

GO:0030145 [list] [network] manganese ion binding	(47 genes)	IEA
GO:0045735 [list] [network] nutrient reservoir activity	(55 genes)	IEA

KEGG

Protein

NP_187246.1

BLAST

NP_187246.1

Orthologous

[Ortholog page] AT3G04200 (ath) GLP9 (ath) AT5G38910 (ath) AT5G38930 (ath) AT5G38940 (ath) AT5G38960 (ath) GLP6 (ath) AT5G39110 (ath) AT5G39120 (ath) AT5G39130 (ath) AT5G39150 (ath) AT5G39160 (ath) AT5G39180 (ath) GER2 (ath) LOC4329389 (osa) LOC4329390 (osa) LOC4329391 (osa) LOC4337008 (osa) LOC4344837 (osa) LOC4344838 (osa) LOC4344841 (osa) LOC4344843 (osa) LOC4344844 (osa) LOC4344846 (osa) LOC4344999 (osa) LOC4351537 (osa) LOC4351538 (osa) LOC4351539 (osa) LOC7480416 (ppo) LOC7487706 (ppo) LOC9272376 (osa) LOC11412593 (mtr) LOC11414422 (mtr) LOC11414568 (mtr) LOC11419235 (mtr) LOC11422481 (mtr) LOC11424098 (mtr) LOC11425078 (mtr) LOC11425316 (mtr) LOC11426661 (mtr) LOC11429372 (mtr) LOC11433625 (mtr) LOC11433956 (mtr) LOC11434895 (mtr) LOC11439325 (mtr) LOC25486309 (mtr) LOC25486310 (mtr) LOC25486313 (mtr) LOC100232941 (vvi) GER1 (vvi) GER4 (vvi) GER7 (vvi) GER5 (vvi) LOC100240807 (vvi) LOC100240839 (vvi) LOC100242546 (vvi) LOC100242782 (vvi) LOC100243126 (vvi) LOC100243864 (vvi) LOC100243981 (vvi) LOC100244270 (vvi) LOC100244552 (vvi) LOC100245589 (vvi) LOC100247597 (vvi) LOC100247931 (vvi) LOC100249403 (vvi) LOC100249435 (vvi) LOC100251041 (vvi) LOC100251187 (vvi) LOC100252737 (vvi) LOC100252783 (vvi) LOC100254415 (vvi) LOC100254460 (vvi) LOC100254770 (vvi) LOC100256198 (vvi) LOC100256308 (vvi) LOC100258077 (vvi) LOC100258094 (vvi) LOC100259518 (vvi) LOC100260968 (vvi) LOC100261293 (vvi) LOC100261880 (vvi) LOC100264708 (vvi) LOC100264862 (vvi) LOC100265074 (vvi) LOC100266609 (vvi) LOC100273345 (zma) LOC100286113 (zma) LOC100306389 (gma) GER3 (gma) GER12 (gma) GER2 (gma) GER13 (gma) GER14 (gma) LOC100780252 (gma) LOC100780789 (gma) LOC100782768 (gma) LOC100783871 (gma) LOC100786576 (gma) GER4 (gma) LOC100788721 (gma) GER11 (gma) LOC100797415 (gma) GER6 (gma) LOC100803440 (gma) LOC100814242 (gma) GER20 (gma) LOC100818120 (gma) LOC100820481 (gma) LOC100853010 (vvi) LOC100853695 (vvi) LOC100853730 (vvi) LOC101249492 (sly) LOC101253136 (sly) LOC101253431 (sly) LOC101253729 (sly) LOC101253951 (sly) LOC101254252 (sly) LOC102660582 (gma) LOC103626662 (zma) LOC103641112 (zma) LOC103641113 (zma) LOC103641117 (zma) LOC103641119 (zma) LOC103641518 (zma) LOC103653008 (zma) LOC103653009 (zma) LOC103653010 (zma) LOC103653011 (zma) LOC103653012 (zma) LOC103653013 (zma) LOC103653014 (zma) LOC103653015 (zma) LOC103653016 (zma) LOC103653018 (zma) LOC103653019 (zma) LOC103653021 (zma) LOC103653022 (zma) LOC103653023 (zma) LOC103653024 (zma) LOC103653025 (zma) LOC103654664 (zma) LOC103833457 (bra) LOC103838740 (bra) LOC103850001 (bra) LOC103850135 (bra) LOC103850187 (bra) LOC103854691 (bra) LOC103863820 (bra) LOC103864164 (bra) LOC103864208 (bra) LOC104882055 (vvi) LOC109121459 (vvi) LOC109121478 (vvi) LOC109121479 (vvi) LOC109121491 (vvi) LOC109123824 (vvi) LOC109123856 (vvi) LOC109123878 (vvi) LOC109123887 (vvi) LOC109123892 (vvi) LOC109123900 (vvi) LOC109123939 (vvi) LOC109945489 (zma) LOC112935981 (osa) LOC112935992 (osa) LOC112936027 (osa)

Subcellular
localization
wolf

plas 3, cyto_plas 2, chlo 2, extr 1, E.R. 1, cyto 1, chlo_mito 1, E.R._vacu 1

(predict for NP_187246.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_187246.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4

Genes directly connected with AT3G05950 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.3	AT1G49570	Peroxidase superfamily protein	[detail]	841381
7.2	AT4G33720	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein	[detail]	829514
6.5	AT5G19890	Peroxidase superfamily protein	[detail]	832111

Coexpressed
gene list

[Coexpressed gene list for AT3G05950]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

258746_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

258746_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

258746_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	819765
Refseq ID (protein)	NP_187246.1

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