[←][→] ath   AT3G27400 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0009624 [list] [network] response to nematode  (84 genes)  IMP  
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (24 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_001326295.1  NP_189376.1 
BLAST NP_001326295.1  NP_189376.1 
Orthologous [Ortholog page] 9612 (sly)  AT3G07010 (ath)  AT3G24230 (ath)  AT3G24670 (ath)  AT4G13210 (ath)  AT4G13710 (ath)  AT4G24780 (ath)  AT5G48900 (ath)  AT5G63180 (ath)  AT1G67750 (ath)  LOC4335013 (osa)  LOC7453817 (ppo)  LOC7458080 (ppo)  LOC7460526 (ppo)  LOC7467675 (ppo)  LOC7469382 (ppo)  LOC7481246 (ppo)  LOC7488611 (ppo)  LOC7494805 (ppo)  LOC11408829 (mtr)  LOC11409358 (mtr)  LOC11411484 (mtr)  LOC11413286 (mtr)  LOC11426383 (mtr)  LOC25483116 (mtr)  LOC25489517 (mtr)  LOC100101868 (gma)  PL1 (vvi)  PEL (vvi)  LOC100242302 (vvi)  LOC100243265 (vvi)  LOC100251082 (vvi)  LOC100273705 (zma)  LOC100281162 (zma)  LOC100781845 (gma)  LOC100782388 (gma)  LOC100790659 (gma)  LOC100794814 (gma)  LOC100803068 (gma)  LOC100809277 (gma)  LOC100810380 (gma)  LOC100816256 (gma)  LOC101244298 (sly)  LOC101252082 (sly)  PL (sly)  LOC101254639 (sly)  LOC101263458 (sly)  LOC103828610 (bra)  LOC103828688 (bra)  LOC103831011 (bra)  LOC103831201 (bra)  LOC103833411 (bra)  LOC103834896 (bra)  LOC103836561 (bra)  LOC103836991 (bra)  LOC103837270 (bra)  LOC103837461 (bra)  LOC103852424 (bra)  LOC103854567 (bra)  LOC103861505 (bra)  LOC103862557 (bra)  LOC103863605 (bra)  LOC103863641 (bra)  LOC103870710 (bra)  LOC103873738 (bra)  LOC103875221 (bra) 
Subcellular
localization
wolf
chlo 4,  extr 3,  mito 1,  nucl 1,  E.R. 1,  pero 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001326295.1)
extr 6,  chlo 2,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_189376.1)
Subcellular
localization
TargetP
scret 8,  mito 3  (predict for NP_001326295.1)
scret 9  (predict for NP_189376.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT3G27400 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
13.0 AT1G03820 E6-like protein [detail] 839400
9.1 AT2G01610 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 814690
8.5 GASA5 GAST1 protein homolog 5 [detail] 821194
7.1 AT4G39320 microtubule-associated protein-like protein [detail] 830087
7.0 AT5G52390 PAR1 protein [detail] 835315
Coexpressed
gene list		 [Coexpressed gene list for AT3G27400]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257735_at
257735_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257735_at
257735_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257735_at
257735_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822361      
Refseq ID (protein) NP_001326295.1 
NP_189376.1 


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