[←][→] ath   AT3G28720 Gene
functional annotation
Function   transmembrane protein  
GO BP
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001326785.1  NP_189514.1 
BLAST NP_001326785.1  NP_189514.1 
Orthologous [Ortholog page] LOC4341393 (osa)  LOC25495282 (mtr)  LOC100249048 (vvi)  LOC100279525 (zma)  LOC100818221 (gma)  LOC101259498 (sly)  LOC103875136 (bra) 
Subcellular
localization
wolf
chlo 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001326785.1)
chlo 4,  plas 2,  vacu 2,  E.R. 1,  nucl_plas 1  (predict for NP_189514.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001326785.1)
other 3  (predict for NP_189514.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT3G28720 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 NEF1 no exine formation 1 [detail] 831180
7.6 PRA1.B2 prenylated RAB acceptor 1.B2 [detail] 818631
7.1 AT1G73240 nucleoporin protein Ndc1-Nup protein [detail] 843658
6.8 AT2G04620 zinc transporter-like protein [detail] 815004
6.3 EBS3 Alg9-like mannosyltransferase family [detail] 838261
6.3 AT3G14920 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein [detail] 820721
6.1 PS1 Presenilin-1 [detail] 837391
Coexpressed
gene list		 [Coexpressed gene list for AT3G28720]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256579_at
256579_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256579_at
256579_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256579_at
256579_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 822504      
Refseq ID (protein) NP_001326785.1 
NP_189514.1 


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