functional annotation |
Function |
anaphase-promoting complex subunit 8 |
|
GO BP |
GO:0030071 [list] [network] regulation of mitotic metaphase/anaphase transition
|
(17 genes)
|
IEA
|
|
GO:0031347 [list] [network] regulation of defense response
|
(260 genes)
|
IMP
|
|
GO:0051301 [list] [network] cell division
|
(352 genes)
|
IEA
|
|
GO:0007049 [list] [network] cell cycle
|
(516 genes)
|
IEA
|
|
GO:0016567 [list] [network] protein ubiquitination
|
(624 genes)
|
IEA
|
|
|
GO CC |
GO:0005680 [list] [network] anaphase-promoting complex
|
(12 genes)
|
IEA
|
|
GO:0005634 [list] [network] nucleus
|
(10793 genes)
|
ISM
|
|
|
GO MF |
|
KEGG |
ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes) |
|
Protein |
NP_001326941.1
NP_190398.1
|
BLAST |
NP_001326941.1
NP_190398.1
|
Orthologous |
[Ortholog page]
LOC4330199 (osa)
LOC7483468 (ppo)
LOC11428624 (mtr)
LOC25485211 (mtr)
LOC100247356 (vvi)
LOC100249407 (vvi)
LOC100280734 (zma)
LOC100783872 (gma)
LOC100789971 (gma)
ILPA1 (gma)
LOC101260121 (sly)
LOC103873172 (bra)
LOC103874170 (bra)
|
Subcellular localization wolf |
chlo 5,
mito 4,
cyto 1
|
(predict for NP_001326941.1)
|
nucl 3,
nucl_plas 3,
chlo 1,
cyto 1,
mito 1,
plas 1,
chlo_mito 1
|
(predict for NP_190398.1)
|
|
Subcellular localization TargetP |
mito 4,
other 3
|
(predict for NP_001326941.1)
|
mito 3
|
(predict for NP_190398.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath04120 |
Ubiquitin mediated proteolysis |
4 |
|
ath03440 |
Homologous recombination |
3 |
|
ath03030 |
DNA replication |
2 |
|
Genes directly connected with APC8 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
8.9 |
PPK1 |
putative protein kinase 1 |
[detail] |
844108 |
8.0 |
AT2G04235 |
hypothetical protein |
[detail] |
814961 |
7.8 |
APC4 |
Transducin/WD40 repeat-like superfamily protein |
[detail] |
828238 |
7.2 |
HEB2 |
condensin-2 complex subunit H2-like protein |
[detail] |
820925 |
7.0 |
AT3G03970 |
ARM repeat superfamily protein |
[detail] |
819552 |
6.6 |
AT1G06590 |
anaphase-promoting complex subunit |
[detail] |
837170 |
6.6 |
AT3G48210 |
kinetochore protein |
[detail] |
823978 |
5.9 |
AT3G08947 |
ARM repeat superfamily protein |
[detail] |
3768765 |
5.8 |
CDC27a |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
820879 |
5.6 |
POLD2 |
DNA polymerase delta small subunit |
[detail] |
818812 |
5.5 |
AT5G05130 |
DNA/RNA helicase protein |
[detail] |
830395 |
5.5 |
MUS81 |
Restriction endonuclease, type II-like superfamily protein |
[detail] |
829211 |
4.2 |
AT3G13020 |
hAT transposon superfamily protein |
[detail] |
820488 |
|
Coexpressed gene list |
[Coexpressed gene list for APC8]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
252349_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
252349_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
252349_at
X axis is samples (xls file), and Y axis is log-expression.
|