[←][→] ath   AT3G49430 Gene
functional annotation
Function   SER/ARG-rich protein 34A  
GO BP
GO:0000381 [list] [network] regulation of alternative mRNA splicing, via spliceosome  (30 genes)  IBA  
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome  (38 genes)  IBA  
GO:0008380 [list] [network] RNA splicing  (272 genes)  NAS  
GO CC
GO:0016607 [list] [network] nuclear speck  (86 genes)  IBA  
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001078264.1  NP_001190041.1  NP_001325874.1  NP_001325875.1  NP_001325876.1  NP_001325877.1  NP_190512.3 
BLAST NP_001078264.1  NP_001190041.1  NP_001325874.1  NP_001325875.1  NP_001325876.1  NP_001325877.1  NP_190512.3 
Orthologous [Ortholog page] LOC11430819 (mtr)  LOC100786491 (gma)  LOC100800653 (gma)  LOC100853709 (vvi)  LOC101247702 (sly)  LOC103873059 (bra)  LOC103873488 (bra) 
Subcellular
localization
wolf
nucl 4,  mito 2,  vacu 2,  nucl_plas 2  (predict for NP_001078264.1)
nucl 6,  mito 3  (predict for NP_001190041.1)
nucl 6,  mito 3  (predict for NP_001325874.1)
nucl 6,  mito 3  (predict for NP_001325875.1)
nucl 6,  mito 3  (predict for NP_001325876.1)
nucl 6,  mito 3  (predict for NP_001325877.1)
nucl 6,  mito 3  (predict for NP_190512.3)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for NP_001078264.1)
other 8,  mito 5  (predict for NP_001190041.1)
other 8,  mito 5  (predict for NP_001325874.1)
other 8,  mito 5  (predict for NP_001325875.1)
other 8,  mito 5  (predict for NP_001325876.1)
other 8,  mito 5  (predict for NP_001325877.1)
other 8,  mito 5  (predict for NP_190512.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 14
ath03013 RNA transport 3
ath03015 mRNA surveillance pathway 2
Genes directly connected with SR34a on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.4 AtRZ-1c RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein [detail] 830307
9.3 SC35 serine/arginine-rich splicing factor-like protein, putative [detail] 836541
8.6 RS41 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 835279
8.1 RSZ22 serine/arginine-rich 22 [detail] 829285
5.1 AT2G20830 folic acid binding / transferase [detail] 816615
Coexpressed
gene list		 [Coexpressed gene list for SR34a]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252256_at
252256_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252256_at
252256_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252256_at
252256_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824105      
Refseq ID (protein) NP_001078264.1 
NP_001190041.1 
NP_001325874.1 
NP_001325875.1 
NP_001325876.1 
NP_001325877.1 
NP_190512.3 


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