ATTED-II : GeneID search result

[←][→] ath At3g49600 Gene

functional annotation

Function

ubiquitin-specific protease 26

GO BP

GO:0048316 [list] [network] seed development

(1294 genes)

IMP

GO CC

GO:0005730 [list] [network] nucleolus	(387 genes)	HDA
GO:0005634 [list] [network] nucleus	(10305 genes)	ISM

GO MF

KEGG

Protein

NP_001325634.1 NP_001325635.1 NP_566922.1

BLAST

NP_001325634.1 NP_001325635.1 NP_566922.1

Orthologous

[Ortholog page] LOC4331918 (osa) LOC7460962 (ppo) LOC7466456 (ppo) LOC11435462 (mtr) LOC25481892 (mtr) LOC100782778 (gma) LOC100795556 (gma) LOC100814430 (gma) LOC100815770 (gma) LOC101264903 (sly) LOC103873045 (bra) LOC103873478 (bra) LOC123084929 (tae) LOC123093154 (tae) LOC123098427 (tae) LOC123449452 (hvu)

Subcellular
localization
wolf

mito 5, cyto_mito 4, nucl 3, cysk 1, cyto_nucl 1, nucl_plas 1	(predict for NP_001325634.1)
mito 5, cyto_mito 4, nucl 3, cysk 1, cyto_nucl 1, nucl_plas 1	(predict for NP_001325635.1)
mito 5, cyto_mito 4, nucl 3, cysk 1, cyto_nucl 1, nucl_plas 1	(predict for NP_566922.1)

Subcellular
localization
TargetP

other 5, mito 4	(predict for NP_001325634.1)
other 5, mito 4	(predict for NP_001325635.1)
other 5, mito 4	(predict for NP_566922.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with UBP26 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
7.0	AT3G17750	Protein kinase superfamily protein	[detail]	821043
6.8	RGD3	ROOT GROWTH DEFECTIVE 3	[detail]	824595
6.6	SYN4	sister chromatid cohesion 1 protein 4	[detail]	831487
6.3	CPL2	carboxyl-terminal domain (ctd) phosphatase-like 2	[detail]	831743
6.1	AT1G48120	serine/threonine-protein phosphatase 7 long form-like protein	[detail]	841230

Coexpressed
gene list

[Coexpressed gene list for UBP26]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

252275_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

252275_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

252275_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	824122
Refseq ID (protein)	NP_001325634.1
	NP_001325635.1
	NP_566922.1

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