[←][→] ath   AT3G49590 Gene
functional annotation
Function   Autophagy-related protein 13  
GO BP
GO:0006914 [list] [network] autophagy  (55 genes)  IDA  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005776 [list] [network] autophagosome  (21 genes)  IDA  
GO:0031410 [list] [network] cytoplasmic vesicle  (748 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04136 [list] [network] Autophagy - other (40 genes)
Protein NP_001190043.1  NP_190528.1  NP_850673.1 
BLAST NP_001190043.1  NP_190528.1  NP_850673.1 
Orthologous [Ortholog page] LOC4336527 (osa)  LOC7464482 (ppo)  LOC9271984 (osa)  LOC11426224 (mtr)  LOC100245198 (vvi)  LOC100273282 (zma)  LOC100275582 (zma)  LOC100278308 (zma)  LOC100279947 (zma)  LOC100778254 (gma)  LOC100818104 (gma)  LOC101244264 (sly)  LOC101259849 (sly)  LOC103873481 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001190043.1)
nucl 9,  vacu 1,  cysk 1  (predict for NP_190528.1)
nucl 9,  vacu 1,  cysk 1  (predict for NP_850673.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for NP_001190043.1)
other 6,  chlo 4  (predict for NP_190528.1)
other 6,  chlo 4  (predict for NP_850673.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
Genes directly connected with ATG13 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.4 AT4G19860 alpha/beta-Hydrolases superfamily protein [detail] 827730
6.2 AT3G15070 RING/U-box superfamily protein [detail] 820736
5.8 AT3G51130 transmembrane protein [detail] 824277
4.5 AT5G63930 Leucine-rich repeat protein kinase family protein [detail] 836514
Coexpressed
gene list		 [Coexpressed gene list for ATG13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
252264_at
252264_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
252264_at
252264_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
252264_at
252264_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824121      
Refseq ID (protein) NP_001190043.1 
NP_190528.1 
NP_850673.1 


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