[←][→] ath   At3g52380 Gene
functional annotation
Function   chloroplast RNA-binding protein 33    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO:0031425 [list] [network] chloroplast RNA processing  (25 genes)  IMP  
GO CC
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
GO:0003723 [list] [network] RNA binding  (1729 genes)  IDA ISS  
KEGG
Protein NP_190806.1 
BLAST NP_190806.1 
Orthologous [Ortholog page] LOC4342438 (osa)  LOC7488081 (ppo)  LOC7497651 (ppo)  LOC11435081 (mtr)  LOC25499498 (mtr)  LOC100789843 (gma)  LOC100799014 (gma)  LOC100814852 (gma)  LOC101261547 (sly)  LOC103860758 (bra)  LOC103863467 (bra)  LOC123045017 (tae)  LOC123052842 (tae)  LOC123188722 (tae)  LOC123426232 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_190806.1)
Subcellular
localization
TargetP
chlo 8,  scret 3  (predict for NP_190806.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath03010 Ribosome 2
Genes directly connected with CP33 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.0 AT3G08740 elongation factor P (EF-P) family protein [detail] 820021
11.4 AT2G37660 NAD(P)-binding Rossmann-fold superfamily protein [detail] 818343
10.7 emb2726 elongation factor Ts family protein [detail] 829027
9.2 AT5G28500 rubisco accumulation factor-like protein [detail] 832943
8.9 AT1G62780 dimethylallyl, adenosine tRNA methylthiotransferase [detail] 842577
7.7 CCB1 cofactor assembly of complex C [detail] 822283
7.5 AT2G35410 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 818107
7.4 AT2G33180 uncharacterized protein [detail] 817879
7.2 AT2G20690 lumazine-binding family protein [detail] 816597
6.9 AT2G17240 arginine/serine-rich-like splicing factor [detail] 816229
Coexpressed
gene list		 [Coexpressed gene list for CP33]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256678_at
256678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256678_at
256678_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256678_at
256678_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824403      
Refseq ID (protein) NP_190806.1 


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