[←][→] ath   AT3G54670 Gene
functional annotation
Function   Structural maintenance of chromosomes (SMC) family protein  
GO BP
GO:0007062 [list] [network] sister chromatid cohesion  (35 genes)  IMP  
GO CC
GO:0008278 [list] [network] cohesin complex  (8 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001319748.1 
BLAST NP_001319748.1 
Orthologous [Ortholog page] LOC4352932 (osa)  LOC25479419 (mtr)  LOC25484262 (mtr)  LOC100134876 (sly)  LOC100263447 (vvi)  LOC100272324 (zma)  LOC100785315 (gma)  LOC100791953 (gma)  LOC103841370 (bra) 
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for NP_001319748.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319748.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with TTN8 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.6 AT5G47690 binding protein [detail] 834820
10.5 TTN7 Structural maintenance of chromosomes (SMC) family protein [detail] 817259
10.0 AT2G33435 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 817909
9.5 UBP13 ubiquitin-specific protease 13 [detail] 820364
9.3 ESP3 RNA helicase family protein [detail] 840143
8.4 ALY3 DNA binding protein [detail] 821697
8.1 ATCHR12 SNF2/Brahma-type chromatin-remodeling protein CHR12 [detail] 819772
7.7 SCC3 sister-chromatid cohesion protein 3 [detail] 819410
6.6 AT1G58025 DNA-binding bromodomain-containing protein [detail] 842169
6.0 AT4G00990 Transcription factor jumonji (jmjC) domain-containing protein [detail] 827933
5.7 ALY2 ALWAYS EARLY 2 [detail] 819702
Coexpressed
gene list		 [Coexpressed gene list for TTN8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251851_at
251851_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251851_at
251851_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251851_at
251851_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824632      
Refseq ID (protein) NP_001319748.1 


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