[←][→] ath   At3g54770 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010029 [list] [network] regulation of seed germination  (93 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA  
KEGG
Protein NP_001030860.1  NP_001327150.1  NP_191037.1 
BLAST NP_001030860.1  NP_001327150.1  NP_191037.1 
Orthologous [Ortholog page] LOC4332479 (osa)  LOC7469768 (ppo)  LOC7489623 (ppo)  LOC25499746 (mtr)  LOC100780861 (gma)  LOC100782522 (gma)  LOC100813699 (gma)  LOC101251083 (sly)  LOC103829305 (bra)  LOC103841379 (bra)  LOC103863206 (bra)  LOC123085540 (tae)  LOC123092496 (tae)  LOC123097810 (tae)  LOC123448943 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001030860.1)
nucl 10  (predict for NP_001327150.1)
nucl 9  (predict for NP_191037.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001030860.1)
other 9  (predict for NP_001327150.1)
other 9  (predict for NP_191037.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with ARP1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 AT4G25250 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 828628
8.4 AT3G50640 uncharacterized protein [detail] 824227
7.4 scpl40 serine carboxypeptidase-like 40 [detail] 825522
6.9 AT4G28650 Leucine-rich repeat transmembrane protein kinase family protein [detail] 828983
6.4 AT5G14150 Emb:.1 protein, putative (Protein of unknown function, DUF642) [detail] 831265
5.7 HB20 homeobox protein 20 [detail] 821232
5.5 AT5G45210 Disease resistance protein (TIR-NBS-LRR class) family [detail] 834557
5.3 WIH3 cysteine-rich TM module stress tolerance protein [detail] 6240705
Coexpressed
gene list		 [Coexpressed gene list for ARP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251857_at
251857_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251857_at
251857_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251857_at
251857_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824642      
Refseq ID (protein) NP_001030860.1 
NP_001327150.1 
NP_191037.1 


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