[←][→] ath   AT3G54930 Gene
functional annotation
Function   Protein phosphatase 2A regulatory B subunit family protein  
GO BP
GO:0031952 [list] [network] regulation of protein autophosphorylation  (8 genes)  IBA  
GO:0006470 [list] [network] protein dephosphorylation  (133 genes)  IBA  
GO:0007165 [list] [network] signal transduction  (1575 genes)  IEA  
GO CC
GO:0000159 [list] [network] protein phosphatase type 2A complex  (20 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA ISM  
GO MF
GO:0072542 [list] [network] protein phosphatase activator activity  (9 genes)  IBA  
KEGG ath03015 [list] [network] mRNA surveillance pathway (115 genes)
Protein NP_001326909.1  NP_001326910.1  NP_191053.1 
BLAST NP_001326909.1  NP_001326910.1  NP_191053.1 
Orthologous [Ortholog page] LOC103830000 (bra)  LOC103841405 (bra) 
Subcellular
localization
wolf
cyto 6,  mito 1,  nucl 1,  plas 1,  pero 1,  chlo_mito 1,  cyto_mito 1,  nucl_plas 1  (predict for NP_001326909.1)
cyto 6,  nucl 1,  mito 1,  plas 1,  pero 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_001326910.1)
cyto 6,  nucl 1,  mito 1,  plas 1,  pero 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_191053.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001326909.1)
chlo 7  (predict for NP_001326910.1)
chlo 7  (predict for NP_191053.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT3G54930 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.8 AT3G51470 Protein phosphatase 2C family protein [detail] 824310
5.1 ORP1D OSBP(oxysterol binding protein)-related protein 1D [detail] 837875
5.1 FZR2 FIZZY-related 2 [detail] 828390
Coexpressed
gene list		 [Coexpressed gene list for AT3G54930]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251865_at
251865_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251865_at
251865_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251865_at
251865_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824658      
Refseq ID (protein) NP_001326909.1 
NP_001326910.1 
NP_191053.1 


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