[←][→] ath   At3g55200 Gene
functional annotation
Function   Cleavage and polyadenylation specificity factor (CPSF) A subunit protein      
GO BP
GO:0048481 [list] [network] plant ovule development  (60 genes)  IMP  
GO:0055046 [list] [network] microgametogenesis  (60 genes)  IMP  
GO:0009846 [list] [network] pollen germination  (80 genes)  IMP  
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA RCA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001319757.1  NP_001327611.1  NP_567015.1 
BLAST NP_001319757.1  NP_001327611.1  NP_567015.1 
Orthologous [Ortholog page] SAP130b (ath)  LOC4328237 (osa)  LOC7457908 (ppo)  LOC7458613 (ppo)  LOC11442895 (mtr)  LOC11444450 (mtr)  LOC25485734 (mtr)  LOC100775785 (gma)  LOC100800457 (gma)  LOC101266504 (sly)  LOC103847020 (bra)  LOC123132158 (tae)  LOC123136182 (tae)  LOC123143694 (tae)  LOC123404214 (hvu) 
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_001319757.1)
nucl 4,  chlo 2,  cyto 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_001327611.1)
nucl 4,  chlo 2,  cyto 1,  plas 1,  pero 1,  cysk 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_567015.1)
Subcellular
localization
TargetP
scret 3  (predict for NP_001319757.1)
scret 3  (predict for NP_001327611.1)
scret 3  (predict for NP_567015.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03013 Nucleocytoplasmic transport 2
Genes directly connected with SAP130a on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
22.0 SAP130b Cleavage and polyadenylation specificity factor (CPSF) A subunit protein [detail] 824688
11.4 emb1507 U5 small nuclear ribonucleoprotein helicase [detail] 838690
9.7 MEE5 Ribosomal protein S5/Elongation factor G/III/V family protein [detail] 837131
8.7 UBA 2 ubiquitin activating enzyme 2 [detail] 830534
Coexpressed
gene list		 [Coexpressed gene list for SAP130a]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 824686      
Refseq ID (protein) NP_001319757.1 
NP_001327611.1 
NP_567015.1 


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