[←][→] ath   At3g55980 Gene
functional annotation
Function   salt-inducible zinc finger 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0009651 [list] [network] response to salt stress  (607 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_001326199.1  NP_567030.1 
BLAST NP_001326199.1  NP_567030.1 
Orthologous [Ortholog page] CZF1 (ath)  AT5G58620 (ath)  LOC4337692 (osa)  LOC7467993 (ppo)  LOC7481474 (ppo)  LOC7484914 (ppo)  LOC7490324 (ppo)  LOC11408632 (mtr)  LOC11415853 (mtr)  LOC11423139 (mtr)  LOC11429482 (mtr)  LOC18101417 (ppo)  LOC25490901 (mtr)  LOC25490903 (mtr)  LOC100783376 (gma)  LOC100787878 (gma)  LOC100795085 (gma)  LOC100806121 (gma)  LOC100812481 (gma)  LOC100819521 (gma)  LOC101257277 (sly)  LOC101258155 (sly)  LOC103841501 (bra)  LOC103845296 (bra)  LOC103857910 (bra)  LOC103866976 (bra)  LOC123109020 (tae)  LOC123180268 (tae)  LOC123189473 (tae)  LOC123403335 (hvu)  LOC123411913 (hvu) 
Subcellular
localization
wolf
nucl 6,  golg 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001326199.1)
chlo 4,  nucl 3,  cyto 1,  nucl_plas 1  (predict for NP_567030.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_001326199.1)
other 6  (predict for NP_567030.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04016 MAPK signaling pathway - plant 2
Genes directly connected with SZF1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
16.1 DIC2 dicarboxylate carrier 2 [detail] 828559
16.1 AT4G29780 nuclease [detail] 829100
14.4 STZ salt tolerance zinc finger [detail] 839666
13.3 CZF1 zinc finger (CCCH-type) family protein [detail] 818605
13.0 WRKY40 WRKY DNA-binding protein 40 [detail] 844423
12.9 WRKY33 WRKY DNA-binding protein 33 [detail] 818429
12.3 ACS6 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 [detail] 826730
11.5 AT1G07135 glycine-rich protein [detail] 837224
11.2 ATL2 TOXICOS EN LEVADURA 2 [detail] 820924
10.6 ERF6 ethylene responsive element binding factor 6 [detail] 827463
10.0 AT3G56880 VQ motif-containing protein [detail] 824855
9.2 CPK32 calcium-dependent protein kinase 32 [detail] 824920
8.5 CYP707A3 cytochrome P450, family 707, subfamily A, polypeptide 3 [detail] 834570
8.2 AT3G59080 Eukaryotic aspartyl protease family protein [detail] 825077
6.0 DOF1 DOF zinc finger protein 1 [detail] 841595
Coexpressed
gene list		 [Coexpressed gene list for SZF1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251745_at
251745_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251745_at
251745_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251745_at
251745_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 824764      
Refseq ID (protein) NP_001326199.1 
NP_567030.1 


The preparation time of this page was 0.6 [sec].