[←][→] ath   At3g58560 Gene
functional annotation
Function   DNAse I-like superfamily protein      
GO BP
GO:0005986 [list] [network] sucrose biosynthetic process  (12 genes)  IGI  
GO:0019252 [list] [network] starch biosynthetic process  (25 genes)  IGI  
GO:0006397 [list] [network] mRNA processing  (183 genes)  IGI  
GO CC
GO:0000932 [list] [network] P-body  (32 genes)  IPI  
GO MF
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_191415.2 
BLAST NP_191415.2 
Orthologous [Ortholog page] AT3G58580 (ath)  LOC4331740 (osa)  LOC4348610 (osa)  LOC7469907 (ppo)  LOC7479509 (ppo)  LOC25483567 (mtr)  LOC25499554 (mtr)  LOC100775270 (gma)  LOC100819402 (gma)  LOC101255473 (sly)  LOC101256818 (sly)  LOC103830166 (bra)  LOC103830169 (bra)  LOC103862977 (bra)  LOC123043896 (tae)  LOC123118223 (tae)  LOC123180866 (tae)  LOC123429162 (hvu) 
Subcellular
localization
wolf
chlo 4,  nucl 2,  mito 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_191415.2)
Subcellular
localization
TargetP
other 7  (predict for NP_191415.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT3G58560 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.9 AT1G43690 ubiquitin interaction motif-containing protein [detail] 840956
7.7 LBA1 RNA helicase [detail] 834747
7.1 AT1G07705 NOT2 / NOT3 / NOT5 family [detail] 837284
5.6 AT5G50340 DNA repair protein RadA-like protein [detail] 835101
Coexpressed
gene list		 [Coexpressed gene list for AT3G58560]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251581_at
251581_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251581_at
251581_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251581_at
251581_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825025      
Refseq ID (protein) NP_191415.2 


The preparation time of this page was 0.1 [sec].