[←][→] ath   AT3G58580 Gene
functional annotation
Function   DNAse I-like superfamily protein  
GO BP
GO:0000289 [list] [network] nuclear-transcribed mRNA poly(A) tail shortening  (6 genes)  IBA  
GO CC
GO:0030014 [list] [network] CCR4-NOT complex  (21 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004535 [list] [network] poly(A)-specific ribonuclease activity  (19 genes)  IBA  
GO:0000175 [list] [network] 3'-5'-exoribonuclease activity  (32 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_191417.2 
BLAST NP_191417.2 
Orthologous [Ortholog page] AT3G58560 (ath)  LOC4331740 (osa)  LOC4348610 (osa)  LOC25483567 (mtr)  LOC25499554 (mtr)  LOC100265801 (vvi)  LOC100279626 (zma)  LOC100279717 (zma)  LOC100280629 (zma)  LOC100775270 (gma)  LOC100819402 (gma)  LOC101255473 (sly)  LOC101256818 (sly)  LOC103830166 (bra)  LOC103830169 (bra)  LOC103841733 (bra)  LOC103862977 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  nucl_plas 1  (predict for NP_191417.2)
Subcellular
localization
TargetP
other 7  (predict for NP_191417.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
ath04141 Protein processing in endoplasmic reticulum 2
ath03015 mRNA surveillance pathway 2
Genes directly connected with AT3G58580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 AT3G63460 transducin family protein / WD-40 repeat family protein [detail] 825521
7.5 SNF4 sucrose nonfermenting-like protein [detail] 837423
7.2 AT1G73930 polarity axis stabilization protein [detail] 843730
7.1 AT2G42230 C-CAP/cofactor C-like domain-containing protein [detail] 818823
7.0 AT3G58560 DNAse I-like superfamily protein [detail] 825025
7.0 AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 833507
4.5 AT1G26190 Phosphoribulokinase / Uridine kinase family [detail] 839160
Coexpressed
gene list		 [Coexpressed gene list for AT3G58580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251582_at
251582_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251582_at
251582_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251582_at
251582_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825027      
Refseq ID (protein) NP_191417.2 


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