[←][→] ath   At3g62310 Gene
functional annotation
Function   RNA helicase family protein  
GO BP
GO:0006397 [list] [network] mRNA processing  (183 genes)  IEA  
GO:0008380 [list] [network] RNA splicing  (191 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001325529.1  NP_001325530.1  NP_191790.1 
BLAST NP_001325529.1  NP_001325530.1  NP_191790.1 
Orthologous [Ortholog page] AT2G47250 (ath)  LOC4332645 (osa)  LOC7455416 (ppo)  LOC7481418 (ppo)  LOC11407634 (mtr)  LOC11424621 (mtr)  LOC100807162 (gma)  LOC100817506 (gma)  LOC100819776 (gma)  LOC101263245 (sly)  LOC103831437 (bra)  LOC103842049 (bra)  LOC103858239 (bra)  LOC123085691 (tae)  LOC123092313 (tae)  LOC123097652 (tae)  LOC123448799 (hvu) 
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1,  plas 1,  vacu 1,  E.R. 1,  golg 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_001325529.1)
cyto 7,  nucl 1,  chlo 1,  cysk 1,  nucl_plas 1  (predict for NP_001325530.1)
cyto 6,  nucl 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_191790.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001325529.1)
other 8  (predict for NP_001325530.1)
other 8  (predict for NP_191790.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath00970 Aminoacyl-tRNA biosynthesis 3
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT3G62310 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.9 AT2G47250 RNA helicase family protein [detail] 819338
7.7 AT2G19540 Transducin family protein / WD-40 repeat family protein [detail] 816473
7.0 AT4G13780 methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS [detail] 827012
6.9 UAP56a DEAD/DEAH box RNA helicase family protein [detail] 830986
6.5 MAK10 MAK10 homologue [detail] 815566
4.0 ASY2 DNA-binding HORMA family protein [detail] 829353
Coexpressed
gene list		 [Coexpressed gene list for AT3G62310]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251265_at
251265_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251265_at
251265_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251265_at
251265_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825404      
Refseq ID (protein) NP_001325529.1 
NP_001325530.1 
NP_191790.1 


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