[←][→] ppo   POPTR_002G192500v3 Gene
functional annotation
Function   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2  
GO BP
GO CC
GO MF
KEGG pop03040 [list] [network] Spliceosome (121 genes)
Protein XP_002301528.1  XP_024451456.1  XP_024451457.1  XP_024451458.1 
BLAST XP_002301528.1  XP_024451456.1  XP_024451457.1  XP_024451458.1 
Orthologous [Ortholog page] AT2G47250 (ath)  AT3G62310 (ath)  LOC4332645 (osa)  LOC7455416 (ppo)  LOC11407634 (mtr)  LOC11424621 (mtr)  LOC100191798 (zma)  LOC100253689 (vvi)  LOC100282531 (zma)  LOC100807162 (gma)  LOC100817506 (gma)  LOC100819776 (gma)  LOC101263245 (sly)  LOC103842049 (bra)  LOC103858239 (bra) 
Subcellular
localization
wolf
cyto 9,  chlo 1,  nucl 1  (predict for XP_002301528.1)
cyto 5,  chlo 1,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_024451456.1)
cyto 7,  cysk 1,  chlo 1,  nucl 1,  cysk_plas 1  (predict for XP_024451457.1)
cyto 6,  nucl 2,  chlo 1,  cysk 1  (predict for XP_024451458.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002301528.1)
other 6  (predict for XP_024451456.1)
other 6  (predict for XP_024451457.1)
other 6  (predict for XP_024451458.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 RNA transport 2
ppo03015 mRNA surveillance pathway 2
Genes directly connected with LOC7481418 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.3 LOC7455416 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [detail] 7455416
5.6 LOC7467895 protein RIK [detail] 7467895
5.6 LOC7488147 uncharacterized LOC7488147 [detail] 7488147
5.5 LOC7481415 flowering time control protein FCA [detail] 7481415
5.4 LOC7477037 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 [detail] 7477037
4.9 LOC7474671 N-alpha-acetyltransferase 35, NatC auxiliary subunit [detail] 7474671
4.5 LOC7473023 CD2 antigen cytoplasmic tail-binding protein 2 [detail] 7473023
4.4 LOC7468747 tRNA pseudouridine(38/39) synthase [detail] 7468747
4.1 LOC7464884 lysophospholipid acyltransferase LPEAT2 [detail] 7464884
3.8 LOC7475778 regulator of nonsense transcripts UPF3 [detail] 7475778
3.8 LOC7473243 uncharacterized LOC7473243 [detail] 7473243
Coexpressed
gene list		 [Coexpressed gene list for LOC7481418]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 7481418      
Refseq ID (protein) XP_002301528.1 
XP_024451456.1 
XP_024451457.1 
XP_024451458.1 


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