[←][→] ath   At4g00170 Gene
functional annotation
Function   Plant VAMP (vesicle-associated membrane protein) family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO MF
KEGG
Protein NP_001329892.1  NP_567153.1 
BLAST NP_001329892.1  NP_567153.1 
Orthologous [Ortholog page] LOC780601 (tae)  PVA12 (ath)  VAP27-1 (ath)  LOC4336509 (osa)  LOC4344689 (osa)  LOC4344695 (osa)  LOC7453954 (ppo)  LOC7453956 (ppo)  LOC7471620 (ppo)  LOC11412003 (mtr)  LOC11424030 (mtr)  LOC11426935 (mtr)  LOC18094564 (ppo)  LOC18105191 (ppo)  LOC100305725 (gma)  LOC100527687 (gma)  LOC100779655 (gma)  LOC100791280 (gma)  LOC100798247 (gma)  LOC100805159 (gma)  LOC101244532 (sly)  LOC101244994 (sly)  LOC101245885 (sly)  LOC101254623 (sly)  LOC101264447 (sly)  LOC103830133 (bra)  LOC103830268 (bra)  LOC103841907 (bra)  LOC103858157 (bra)  LOC103858877 (bra)  LOC103862872 (bra)  LOC103866194 (bra)  LOC120577098 (mtr)  LOC123046019 (tae)  LOC123053892 (tae)  LOC123147320 (tae)  LOC123147352 (tae)  LOC123161490 (tae)  LOC123165281 (tae)  LOC123169782 (tae)  LOC123189780 (tae)  LOC123407531 (hvu)  LOC123408940 (hvu)  LOC123427348 (hvu) 
Subcellular
localization
wolf
chlo 4,  golg 2,  chlo_mito 2,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_001329892.1)
golg 3,  pero 2,  chlo 1,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for NP_567153.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001329892.1)
other 7,  chlo 3  (predict for NP_567153.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
Genes directly connected with AT4G00170 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.7 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 819606
6.5 COP8 Proteasome component (PCI) domain protein [detail] 834312
6.1 PBS2 cysteine and histidine-rich domain-containing protein RAR1 [detail] 835244
4.8 AGG2 G-protein gamma subunit 2 [detail] 825532
4.1 TY1 thioredoxin Y1 [detail] 844010
Coexpressed
gene list		 [Coexpressed gene list for AT4G00170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255704_at
255704_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255704_at
255704_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255704_at
255704_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828017      
Refseq ID (protein) NP_001329892.1 
NP_567153.1 


The preparation time of this page was 0.5 [sec].